RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TM4SF19Q96DZ7 209 aa9.79□□□□□ -0.84
COPA-201ENST00000241704 CHST6Q9GZX3 395 aa9.79□□□□□ -0.84
COPA-201ENST00000241704 ADGRL4Q9HBW9 690 aa9.79□□□□□ -0.84
COPA-201ENST00000241704 B9D1Q9UPM9 204 aa9.79□□□□□ -0.84
COPA-201ENST00000241704 MRPS28Q9Y2Q9 187 aaKnown RBP9.79□□□□□ -0.84
COPA-201ENST00000241704 ACTL6AO96019 429 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 FUT7Q11130 342 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 OR8G1Q15617 311 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 GAB4Q2WGN9 574 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 RPUSD3Q6P087 351 aaKnown RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 ZNF808Q8N4W9 903 aaPredicted RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 SCARF2Q96GP6 870 aaPredicted RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 ZMAT3Q9HA38 289 aaKnown RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 IGHV5-10-1A0A0J9YXX1 117 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 OGG1O15527 345 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 H2AFB1P0C5Y9 115 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 ZNF85Q03923 595 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 TMEM255AQ5JRV8 349 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 PLPP7Q8NBV4 271 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 GOLT1BQ9Y3E0 138 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 SIP14410 1827 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 MEX3AA1L020 520 aaKnown RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 OR5H15A6NDH6 313 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 OR5H1A6NKK0 313 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 FOXS1O43638 330 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 ZNF354AO60765 605 aaPredicted RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 PTBP3O95758 552 aaKnown RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 ARR3P36575 388 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 RPS27P42677 84 aaKnown RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 ANKRD16Q6P6B7 361 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 HAS2Q92819 552 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 PACRGQ96M98 296 aaPredicted RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 TP53TG5Q9Y2B4 290 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 ANK1P16157 1881 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 A0A0G2JK05 382 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 TK1P04183 234 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 SCAND1P57086 179 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 H3F3AP84243 136 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 SURF2Q15527 256 aaPredicted RBP9.78□□□□□ -0.84
COPA-201ENST00000241704 MIDNQ504T8 468 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 DRAM2Q6UX65 266 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 GCNT2Q8N0V5 402 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 MOB1AQ9H8S9 216 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 PILRAQ9UKJ1 303 aa9.78□□□□□ -0.84
COPA-201ENST00000241704 LOC107986453A0A1B0GWG9 222 aa9.77□□□□□ -0.84
COPA-201ENST00000241704 COLCA2A8K830 154 aa9.77□□□□□ -0.84
COPA-201ENST00000241704 HSPB6O14558 160 aa9.77□□□□□ -0.84
COPA-201ENST00000241704 SCAF4O95104 1147 aaKnown RBP9.77□□□□□ -0.84
COPA-201ENST00000241704 IFNA5P01569 189 aa9.77□□□□□ -0.84
COPA-201ENST00000241704 C4orf17Q53FE4 359 aa9.77□□□□□ -0.84
COPA-201ENST00000241704 CBLN3Q6UW01 205 aa9.77□□□□□ -0.84
COPA-201ENST00000241704 TMPRSS7Q7RTY8 843 aa9.77□□□□□ -0.84
COPA-201ENST00000241704 OR52N5Q8NH56 324 aa9.77□□□□□ -0.84
COPA-201ENST00000241704 NICN1Q9BSH3 213 aa9.77□□□□□ -0.84
COPA-201ENST00000241704 SLC35B3Q9H1N7 401 aa9.77□□□□□ -0.84
COPA-201ENST00000241704 PDCD11Q14690 1871 aaKnown RBP9.77□□□□□ -0.85
COPA-201ENST00000241704 CST4P01036 141 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 FABP6P51161 128 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 PPP1R1AQ13522 171 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 SLC17A1Q14916 467 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 C2orf68Q2NKX9 166 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 C2orf76Q3KRA6 126 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 TMEM211Q6ICI0 200 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 DOK3Q7L591 496 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 SGPP2Q8IWX5 399 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 DEFB108BQ8NET1 73 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 SLC5A6Q9Y289 635 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 DTX4Q9Y2E6 619 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 STRAPQ9Y3F4 350 aaKnown RBP9.77□□□□□ -0.85
COPA-201ENST00000241704 TMEM229AB2RXF0 380 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 CRHP06850 196 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 GUSBP08236 651 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 RCC1P18754 421 aaPredicted RBP9.77□□□□□ -0.85
COPA-201ENST00000241704 SLC25A1P53007 311 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 SLC36A1Q7Z2H8 476 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 ADGRE4PQ86SQ3 457 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 PRR7Q8TB68 274 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 SLC25A28Q96A46 364 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 RAB33BQ9H082 229 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 RAB22AQ9UL26 194 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 V9GYS6 101 aa9.77□□□□□ -0.85
COPA-201ENST00000241704 CDC42EP2O14613 210 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 GSTP1P09211 210 aaKnown RBP9.76□□□□□ -0.85
COPA-201ENST00000241704 LTBRP36941 435 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 EDDM3AQ14507 147 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 ZNF718Q3SXZ3 478 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 COMTD1Q86VU5 262 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 ZNF695Q8IW36 515 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 ABCA7Q8IZY2 2146 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 TMEM52Q8NDY8 209 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 PIGTQ969N2 578 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 RAB24Q969Q5 203 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 ALKBH3Q96Q83 286 aaPredicted RBP9.76□□□□□ -0.85
COPA-201ENST00000241704 C9orf170A2RU37 121 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 C5orf49A4QMS7 147 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 RAB27BO00194 218 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 DHHO43323 396 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 CTAG2O75638 210 aa9.76□□□□□ -0.85
COPA-201ENST00000241704 SELEP16581 610 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms