RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 OR51F2Q8NH61 342 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 FAM210AQ96ND0 272 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 ST6GALNAC5Q9BVH7 336 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 MED12LQ86YW9 2145 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 AHRRA9YTQ3 701 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 EFSO43281 561 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 TAS2R31P59538 309 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 DHRS2Q13268 280 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 TAF9Q16594 264 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 TBC1D28Q2M2D7 210 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 C11orf88Q6PI97 169 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 Q6ZT83 130 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 MRGPRFQ96AM1 343 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 SCGB3A2Q96PL1 93 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 EDARQ9UNE0 448 aa20.07■□□□□ 0.8
MSX2-201ENST00000239243 TNRC6AQ8NDV7 1962 aaKnown RBP20.07■□□□□ 0.8
MSX2-201ENST00000239243 IGKV1-12A0A0C4DH73 117 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 PQLC2LA1A4F0 135 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 GOSR2O14653 212 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 KLK10O43240 276 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 RGS11O94810 467 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 NGFP01138 241 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 IGKV1D-12P01611 117 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 TSPAN5P62079 268 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 MRPL49Q13405 166 aaKnown RBP20.06■□□□□ 0.8
MSX2-201ENST00000239243 CEACAM21Q3KPI0 293 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 ZNF611Q8N823 705 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 EMG1Q92979 244 aaKnown RBP20.06■□□□□ 0.8
MSX2-201ENST00000239243 OR2AT4A6NND4 320 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 F5H5P2 479 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 G3V3Q6 166 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 SLC22A5O76082 557 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 HLA-AP01891 365 aaKnown RBP20.06■□□□□ 0.8
MSX2-201ENST00000239243 HOXB1P14653 301 aaPredicted RBP20.06■□□□□ 0.8
MSX2-201ENST00000239243 IGHV1-2P23083 117 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 HLXQ14774 488 aaPredicted RBP20.06■□□□□ 0.8
MSX2-201ENST00000239243 ASCL5Q7RTU5 278 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 SAXO1Q8IYX7 474 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 OR6K3Q8NGY3 331 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 WBP1Q96G27 269 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 GPR137Q96N19 417 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 ZNF75AQ96N20 296 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 HIST1H2AAQ96QV6 131 aa20.06■□□□□ 0.8
MSX2-201ENST00000239243 RIF1Q5UIP0 2472 aaKnown RBP20.06■□□□□ 0.8
MSX2-201ENST00000239243 FIGNL2A6NMB9 653 aa20.05■□□□□ 0.8
MSX2-201ENST00000239243 LYG2Q86SG7 212 aa20.05■□□□□ 0.8
MSX2-201ENST00000239243 OR5AP2Q8NGF4 316 aa20.05■□□□□ 0.8
MSX2-201ENST00000239243 OR5M9Q8NGP3 310 aa20.05■□□□□ 0.8
MSX2-201ENST00000239243 SNIP1Q8TAD8 396 aaKnown RBP20.05■□□□□ 0.8
MSX2-201ENST00000239243 OPN4Q9UHM6 478 aa20.05■□□□□ 0.8
MSX2-201ENST00000239243 MUC6Q6W4X9 2439 aa20.05■□□□□ 0.8
MSX2-201ENST00000239243 CD300LBA8K4G0 201 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 CEACAM18A8MTB9 384 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 TOXO94900 526 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 WNT5AP41221 380 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 UBE2MP61081 183 aaKnown RBP20.04■□□□□ 0.8
MSX2-201ENST00000239243 CHRFAM7AQ494W8 412 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 SIGIRRQ6IA17 410 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 RPUSD3Q6P087 351 aaKnown RBP20.04■□□□□ 0.8
MSX2-201ENST00000239243 LPCAT3Q6P1A2 487 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 TAAR6Q96RI8 345 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 TMPRSS13Q9BYE2 586 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 ZNF701Q9NV72 531 aaPredicted RBP20.04■□□□□ 0.8
MSX2-201ENST00000239243 ST3GAL6Q9Y274 331 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 ZFHX2Q9C0A1 2572 aaPredicted RBP20.04■□□□□ 0.8
MSX2-201ENST00000239243 ANKRD30BLA7E2S9 258 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 IL2RAP01589 272 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 CHATP28329 748 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 ACSF3Q4G176 576 aaPredicted RBP20.04■□□□□ 0.8
MSX2-201ENST00000239243 ZNF767PQ75MW2 155 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 CALHM1Q8IU99 346 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 FBXL14Q8N1E6 418 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 CNEP1R1Q8N9A8 125 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 OR5A2Q8NGI9 324 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 MPC1Q9Y5U8 109 aa20.04■□□□□ 0.8
MSX2-201ENST00000239243 SFTPBP07988 381 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 C4BPBP20851 252 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 ZBTB25P24278 435 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 CD34P28906 385 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 H2BFSP57053 126 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 DHODHQ02127 395 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 C17orf107Q6ZR85 190 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 Q6ZS92 163 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 SLC25A26Q70HW3 274 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 Q8NFD4 153 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 PPA2Q9H2U2 334 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 DMXL1Q9Y485 3027 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 ZNF14P17017 642 aaPredicted RBP20.03■□□□□ 0.8
MSX2-201ENST00000239243 DTYMKP23919 212 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 INO80CQ6PI98 192 aaPredicted RBP20.03■□□□□ 0.8
MSX2-201ENST00000239243 C9orf106Q8NAJ2 232 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 NAXEQ8NCW5 288 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 MARCH1Q8TCQ1 289 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 HPSE2Q8WWQ2 592 aa20.03■□□□□ 0.8
MSX2-201ENST00000239243 ZNF230Q9UIE0 474 aaPredicted RBP20.03■□□□□ 0.8
MSX2-201ENST00000239243 NOP16Q9Y3C1 178 aaKnown RBP20.03■□□□□ 0.8
MSX2-201ENST00000239243 FAM186AA6NE01 2351 aa20.02■□□□□ 0.8
MSX2-201ENST00000239243 FAM90A10PA6NDY2 464 aa20.02■□□□□ 0.8
MSX2-201ENST00000239243 FAM90A18PA6NE21 464 aa20.02■□□□□ 0.8
MSX2-201ENST00000239243 FAM90A16PA6NEW6 464 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms