RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 NPIPA1Q9UND3 350 aa8.3□□□□□ -1.08
HLA-DOA-201ENST00000229829 TGIF2-C20orf24A0A0A6YYL0 155 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 LILRA5A6NI73 299 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 IFITM10A6NMD0 228 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 SYT7O43581 403 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 FOLR2P14207 255 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 KLK2P20151 261 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 DCAF7P61962 342 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 MFAP5Q13361 173 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 ANGPTL5Q86XS5 388 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLAMF6Q96DU3 332 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 A0A0A6YYD4 124 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 RAMP1O60894 148 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 IL2RAP01589 272 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 MBPP02686 304 aaPredicted RBP8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 BCKDHBP21953 392 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 FBLP22087 321 aaKnown RBP8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 EIF5AP63241 154 aaKnown RBP8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 FOXK1P85037 733 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 TLE1Q04724 770 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 TLE3Q04726 772 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 RELQ04864 619 aaPredicted RBP8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF441Q8N8Z8 693 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR9K2Q8NGE7 335 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR51E1Q8TCB6 317 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 RNF133Q8WVZ7 376 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 ASB13Q8WXK3 278 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLC2A8Q9NY64 477 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR14J1Q9UGF5 321 aa8.29□□□□□ -1.08
HLA-DOA-201ENST00000229829 A0A1B0GWJ7 208 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 EFNA2O43921 213 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 CDAP32320 146 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 ARL4DP49703 201 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 BIDP55957 195 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 CLDN6P56747 220 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 HSF1Q00613 529 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 PCK2Q16822 640 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 RNF151Q2KHN1 245 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 AWAT2Q6E213 333 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 LPCAT3Q6P1A2 487 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 GKN2Q86XP6 184 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 THNSL2Q86YJ6 484 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 PNLDC1Q8NA58 520 aaKnown RBP8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLC30A7Q8NEW0 376 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR10AD1Q8NGE0 317 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 C5orf34Q96MH7 638 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 MRPL37Q9BZE1 423 aaKnown RBP8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 PBOV1Q9GZY1 135 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 BANF2Q9H503 90 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 GOLT1BQ9Y3E0 138 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 TEX13DA0A0J9YY54 714 aaPredicted RBP8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 SEC14L6B5MCN3 397 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 C2CD4DB7Z1M9 353 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 SOCS1O15524 211 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 IGLV3-19P01714 112 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 FAM157CP0CG43 387 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 CD38P28907 300 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 MMP16P51512 607 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 NKAIN1Q4KMZ8 207 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 HIST2H3PS2Q5TEC6 136 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 H1FNTQ75WM6 255 aaPredicted RBP8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF101Q8IZC7 436 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 NKAIN3Q8N8D7 197 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 CCDC74BQ96LY2 380 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF319Q9P2F9 582 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 NCOA6Q14686 2063 aaPredicted RBP8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 K7EPK0 472 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 SDCBPO00560 298 aaPredicted RBP8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 NUDT21O43809 227 aaKnown RBP8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 FCGR2CP31995 323 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 PLAC9Q5JTB6 97 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 DMRTA1Q5VZB9 504 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 FAM71E2Q8N5Q1 922 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 PTX4Q96A99 478 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 DDA1Q9BW61 102 aa8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 RIMS4Q9H426 269 aaPredicted RBP8.28□□□□□ -1.08
HLA-DOA-201ENST00000229829 IGHV1OR15-9A0A0B4J2B8 117 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 XRCC2O43543 280 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 HLA-GP17693 338 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 CHATP28329 748 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 HSD11B1P28845 292 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 S100A7P31151 101 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 ZNF93P35789 620 aaPredicted RBP8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 RPS23P62266 143 aaKnown RBP8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 HSD11B2P80365 405 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 HGFACQ04756 655 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 TNFRSF9Q07011 255 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 FOXF1Q12946 379 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 PHF19Q5T6S3 580 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 COMMD2Q86X83 199 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 SLC22A24Q8N4F4 322 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 OR4K15Q8NH41 348 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 RNF126Q9BV68 326 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 FBXL17Q9UF56 701 aa8.27□□□□□ -1.08
HLA-DOA-201ENST00000229829 RAD51DO75771 328 aa8.27□□□□□ -1.09
HLA-DOA-201ENST00000229829 MPIG6BO95866 241 aa8.27□□□□□ -1.09
HLA-DOA-201ENST00000229829 EMP2P54851 167 aa8.27□□□□□ -1.09
HLA-DOA-201ENST00000229829 TMEM50BP56557 158 aa8.27□□□□□ -1.09
HLA-DOA-201ENST00000229829 NUTF2P61970 127 aaKnown RBP8.27□□□□□ -1.09
HLA-DOA-201ENST00000229829 COTL1Q14019 142 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms