RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TMEM42Q69YG0 159 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
GPN3-201ENST00000228827 ACP7Q6ZNF0 438 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 FAM220AQ7Z4H9 259 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 ANGPTL5Q86XS5 388 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 CBR4Q8N4T8 237 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 Q8N7P7 452 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 POC1AQ8NBT0 407 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 C8orf46Q8TAG6 207 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 UNKLQ9H9P5 680 aaKnown RBP11.7□□□□□ -0.54
GPN3-201ENST00000228827 PLEKHA1Q9HB21 404 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 AASSQ9UDR5 926 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 MAB21L2Q9Y586 359 aa11.7□□□□□ -0.54
GPN3-201ENST00000228827 PQLC2LA1A4F0 135 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 RFPL4AA6NLU0 287 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 RFPL4AL1F8VTS6 287 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 SULT1C4O75897 302 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 PGA5P0DJD9 388 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 MDKP21741 143 aaPredicted RBP11.69□□□□□ -0.54
GPN3-201ENST00000228827 CCL1P22362 96 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 ALDH3A2P51648 485 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 CAV3P56539 151 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 TMED1Q13445 227 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 SMIM21Q3B7S5 101 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 ZFP1Q6P2D0 407 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 RDH10Q8IZV5 341 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 FAM185AQ8N0U4 392 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 PRSS35Q8N3Z0 413 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 PNKDQ8N490 385 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 TRUB1Q8WWH5 349 aaKnown RBP11.69□□□□□ -0.54
GPN3-201ENST00000228827 RNFT2Q96EX2 444 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 HRASLS5Q96KN8 279 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 MBOAT4Q96T53 435 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 ADI1Q9BV57 179 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 ZNF747Q9BV97 191 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 CHIAQ9BZP6 476 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 RASL12Q9NYN1 266 aa11.69□□□□□ -0.54
GPN3-201ENST00000228827 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.69□□□□□ -0.54
GPN3-201ENST00000228827 ANKRD61A6NGH8 418 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 DHRS7CA6NNS2 312 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 RNASEK-C17orf49H0YIS7 233 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 INMTO95050 263 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 NXPH2O95156 264 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 IGHV4-59P01825 116 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 KIR3DL2P43630 455 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 Q6ZSR3 168 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 CALHM1Q8IU99 346 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 CD177Q8N6Q3 437 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 SSMEM1Q8WWF3 244 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 SDSLQ96GA7 329 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 OR14J1Q9UGF5 321 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 SLC7A11Q9UPY5 501 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 POLDIP2Q9Y2S7 368 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 FAM96BQ9Y3D0 163 aa11.68□□□□□ -0.54
GPN3-201ENST00000228827 LOC107986453A0A1B0GWG9 222 aa11.67□□□□□ -0.54
GPN3-201ENST00000228827 DAPL1A0PJW8 107 aa11.67□□□□□ -0.54
GPN3-201ENST00000228827 CRYBA1P05813 215 aa11.67□□□□□ -0.54
GPN3-201ENST00000228827 PRDX2P32119 198 aa11.67□□□□□ -0.54
GPN3-201ENST00000228827 UBE2V2Q15819 145 aa11.67□□□□□ -0.54
GPN3-201ENST00000228827 TBC1D15Q8TC07 691 aa11.67□□□□□ -0.54
GPN3-201ENST00000228827 DMRTB1Q96MA1 342 aa11.67□□□□□ -0.54
GPN3-201ENST00000228827 NRIP2Q9BQI9 281 aa11.67□□□□□ -0.54
GPN3-201ENST00000228827 C19orf12Q9NSK7 152 aa11.67□□□□□ -0.54
GPN3-201ENST00000228827 GMPPBQ9Y5P6 360 aa11.67□□□□□ -0.54
GPN3-201ENST00000228827 H0YAE9 185 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 SLC1A7O00341 560 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 NPFFO15130 113 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 NOS1APO75052 506 aaPredicted RBP11.66□□□□□ -0.54
GPN3-201ENST00000228827 EEF1B2P24534 225 aaKnown RBP11.66□□□□□ -0.54
GPN3-201ENST00000228827 OR12D2P58182 307 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 ISL1P61371 349 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 SNRPGP62308 76 aaKnown RBP11.66□□□□□ -0.54
GPN3-201ENST00000228827 GUCA2AQ02747 115 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 BLMHQ13867 455 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 OCLNQ16625 522 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 METAP1DQ6UB28 335 aaPredicted RBP11.66□□□□□ -0.54
GPN3-201ENST00000228827 SHISA2Q6UWI4 295 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 TMEM86BQ8N661 226 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 OR4M1Q8NGD0 313 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 SGMS2Q8NHU3 365 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 TNFRSF14Q92956 283 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 SLAMF9Q96A28 289 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
GPN3-201ENST00000228827 S100A14Q9HCY8 104 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 POMT1Q9Y6A1 747 aa11.66□□□□□ -0.54
GPN3-201ENST00000228827 IGKV1-27A0A075B6S5 117 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 TRBV23-1A0A0A0MS06 115 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 E9PQ18 207 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 J3QLW9 94 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 M0R1W7 72 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 EBAG9O00559 213 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 UBCP0CG48 685 aaKnown RBP11.65□□□□□ -0.54
GPN3-201ENST00000228827 ZNF19P17023 458 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 MPZP25189 248 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 IER3P46695 156 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 RAG2P55895 527 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 ACTC1P68032 377 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 ACTA1P68133 377 aa11.65□□□□□ -0.54
GPN3-201ENST00000228827 SLC25A30Q5SVS4 291 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms