RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 C7orf61Q8IZ16 206 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 OR5C1Q8NGR4 320 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 BORCS8Q96FH0 119 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 NPIPB9F8W1W9 429 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 TBPP20226 339 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 BMP5P22003 454 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 ZNF124Q15973 351 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 MPV17LQ2QL34 196 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 AQP10Q96PS8 301 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 LPAR5Q9H1C0 372 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 PLK3Q9H4B4 646 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 IL17BQ9UHF5 180 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 CA14Q9ULX7 337 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 TRIOBPQ9H2D6 2365 aa12.87□□□□□ -0.35
PRDM4-201ENST00000228437 CSNK1EP49674 416 aaKnown RBP12.86□□□□□ -0.35
PRDM4-201ENST00000228437 LBX1P52954 281 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 ERVS71-1P61550 626 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 RPS16P62249 146 aaKnown RBP12.86□□□□□ -0.35
PRDM4-201ENST00000228437 FHL1Q13642 323 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 ZNF266Q14584 549 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 OR8G1Q15617 311 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 TCRBV21S2A2A0A5A6 115 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 DUSP1P28562 367 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 PTGER4P35408 488 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 RPS23P62266 143 aaKnown RBP12.86□□□□□ -0.35
PRDM4-201ENST00000228437 KHDC3LQ587J8 217 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 WDR25Q64LD2 544 aaPredicted RBP12.86□□□□□ -0.35
PRDM4-201ENST00000228437 SLC38A9Q8NBW4 561 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 PATZ1Q9HBE1 687 aaKnown RBP12.86□□□□□ -0.35
PRDM4-201ENST00000228437 G3V3Y1 287 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 LILRB3O75022 631 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 TTRP02766 147 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 HNRNPA1P09651 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRDM4-201ENST00000228437 CEBPEQ15744 281 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 TMEM176BQ3YBM2 270 aaPredicted RBP12.86□□□□□ -0.35
PRDM4-201ENST00000228437 H1FNTQ75WM6 255 aaPredicted RBP12.86□□□□□ -0.35
PRDM4-201ENST00000228437 LFNGQ8NES3 379 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 OR11L1Q8NGX0 322 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 OR51H1Q8NH63 302 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 SMIM8Q96KF7 97 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 HSD17B6O14756 317 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 SNRPCP09234 159 aaKnown RBP12.86□□□□□ -0.35
PRDM4-201ENST00000228437 S100GP29377 79 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 GFERP55789 205 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 KISS1Q15726 138 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 PRAMEF20Q5VT98 475 aa12.86□□□□□ -0.35
PRDM4-201ENST00000228437 ST8SIA5O15466 376 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 OR2J2O76002 312 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 NOVA1P51513 510 aaKnown RBP12.85□□□□□ -0.35
PRDM4-201ENST00000228437 ZNF684Q5T5D7 378 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 PHF19Q5T6S3 580 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 ASB16Q96NS5 453 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 KCNS2Q9ULS6 477 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 TPRP12270 2363 aaKnown RBP12.85□□□□□ -0.35
PRDM4-201ENST00000228437 F8VVB4 439 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 F8VWA3 439 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 TERTO14746 1132 aaKnown RBP12.85□□□□□ -0.35
PRDM4-201ENST00000228437 TRGC1P0CF51 173 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 PIGCQ92535 297 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 STRAPQ9Y3F4 350 aaKnown RBP12.85□□□□□ -0.35
PRDM4-201ENST00000228437 IL2RAP01589 272 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 CLDN17P56750 224 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 DEFB133Q30KQ1 61 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 PLAC9Q5JTB6 97 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 TMEM230Q96A57 120 aa12.85□□□□□ -0.35
PRDM4-201ENST00000228437 FIGNL2A6NMB9 653 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 PPP5D1E7EU14 171 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 MT-ATP6P00846 226 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 IGHG1P01857 330 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 FCGR3AP08637 254 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 ATP6V0CP27449 155 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 TLE4Q04727 773 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 PMS2P11Q13670 270 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 BTNL8Q6UX41 500 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 GRINAQ7Z429 371 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 CCDC71LQ8N9Z2 235 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 RBMXL1Q96E39 390 aaKnown RBP12.84□□□□□ -0.35
PRDM4-201ENST00000228437 SDSLQ96GA7 329 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 RPP25Q9BUL9 199 aaKnown RBP12.84□□□□□ -0.35
PRDM4-201ENST00000228437 BCO1Q9HAY6 547 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 PLXNA3P51805 1871 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 IGHV2-70P01814 119 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 MBPP02686 304 aaPredicted RBP12.84□□□□□ -0.35
PRDM4-201ENST00000228437 FGF7P21781 194 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 SNIP1Q8TAD8 396 aaKnown RBP12.84□□□□□ -0.35
PRDM4-201ENST00000228437 SPPL3Q8TCT6 385 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 DDIT4LQ96D03 193 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 SLC46A1Q96NT5 459 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 MTIF3Q9H2K0 278 aaKnown RBP12.84□□□□□ -0.35
PRDM4-201ENST00000228437 AURKAIP1Q9NWT8 199 aaPredicted RBP12.84□□□□□ -0.35
PRDM4-201ENST00000228437 TGFBR3LH3BV60 316 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 FBLP22087 321 aaKnown RBP12.84□□□□□ -0.35
PRDM4-201ENST00000228437 PAX6P26367 422 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 CD200P41217 278 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 PKIAP61925 76 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 TPSD1Q9BZJ3 242 aa12.84□□□□□ -0.35
PRDM4-201ENST00000228437 IAPPP10997 89 aa12.83□□□□□ -0.35
PRDM4-201ENST00000228437 HNF1AP20823 631 aa12.83□□□□□ -0.35
PRDM4-201ENST00000228437 AGAP20933 346 aa12.83□□□□□ -0.35
PRDM4-201ENST00000228437 H3F3AP84243 136 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms