RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 RIPPLY1Q0D2K3 151 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 ZNF273Q14593 569 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 GINS1Q14691 196 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 LDLRAD2Q5SZI1 272 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 DEGS2Q6QHC5 323 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 KRT77Q7Z794 578 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 NDUFA11Q86Y39 141 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 CALHM1Q8IU99 346 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 CPOQ8IVL8 374 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 OR4S1Q8NGB4 309 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 GIPC3Q8TF64 312 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 TEAD3Q99594 435 aa12.72□□□□□ -0.37
NME3-201ENST00000219302 CITED2Q99967 270 aaPredicted RBP12.72□□□□□ -0.37
NME3-201ENST00000219302 AURKAIP1Q9NWT8 199 aaPredicted RBP12.72□□□□□ -0.37
NME3-201ENST00000219302 TMEM269A0A1B0GVZ9 245 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 ARRDC5A6NEK1 342 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 SYNGR1O43759 233 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 CEBPDP49716 269 aaPredicted RBP12.71□□□□□ -0.37
NME3-201ENST00000219302 CDK5Q00535 292 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 GK3PQ14409 553 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 SMIM21Q3B7S5 101 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 FAM98BQ52LJ0 330 aaKnown RBP12.71□□□□□ -0.37
NME3-201ENST00000219302 SLC35D3Q5M8T2 416 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 ZBTB37Q5TC79 503 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 TMEM179BQ7Z7N9 219 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 DHFR2Q86XF0 187 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 WFDC9Q8NEX5 89 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 BBS1Q8NFJ9 593 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 SGCDQ92629 289 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 PHF21AQ96BD5 680 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 R3HDM4Q96D70 268 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 MALSU1Q96EH3 234 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 PBOV1Q9GZY1 135 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 GPR84Q9NQS5 396 aa12.71□□□□□ -0.37
NME3-201ENST00000219302 hCG_1809904A0A1W2PP81 198 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 A0A1W2PPE2 198 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 A0A1W2PR64 198 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 A0A1W2PRV1 198 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 ODF3BA8MYP8 253 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 PRR32B1ATL7 298 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 PSMD9O00233 223 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 SLC1A7O00341 560 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 NRASP01111 189 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 TK1P04183 234 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 HMGN1P05114 100 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 FAHP16930 419 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 TRIM25Q14258 630 aaKnown RBP12.7□□□□□ -0.38
NME3-201ENST00000219302 CNN3Q15417 329 aaKnown RBP12.7□□□□□ -0.38
NME3-201ENST00000219302 PLCXD3Q63HM9 321 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 ZNF782Q6ZMW2 699 aaPredicted RBP12.7□□□□□ -0.38
NME3-201ENST00000219302 Q6ZS46 218 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 OR4F17Q8NGA8 305 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 OR51E1Q8TCB6 317 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 OR4F4Q96R69 305 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 OR8B4Q96RC9 309 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 NRIP2Q9BQI9 281 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 YIPF3Q9GZM5 350 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 MUC13Q9H3R2 512 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 HES4Q9HCC6 221 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 LAMP5Q9UJQ1 280 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 PIGLQ9Y2B2 252 aa12.7□□□□□ -0.38
NME3-201ENST00000219302 J3QT63 122 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 GSC2O15499 205 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 HAAOP46952 286 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 ERVK11-1P61568 191 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 ROM1Q03395 351 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 PLA1AQ53H76 456 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 FOXB2Q5VYV0 432 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 TMEM42Q69YG0 159 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 KCTD18Q6PI47 426 aaPredicted RBP12.69□□□□□ -0.38
NME3-201ENST00000219302 PIGWQ7Z7B1 504 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 TMEM219Q86XT9 240 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 ZNF573Q86YE8 665 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 ARHGAP24Q8N264 748 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 OR11H6Q8NGC7 330 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 CHID1Q9BWS9 393 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 PRSS22Q9GZN4 317 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 C1orf21Q9H246 121 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 NUFIP1Q9UHK0 495 aaKnown RBP12.69□□□□□ -0.38
NME3-201ENST00000219302 ENPP5Q9UJA9 477 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 ARL2BPQ9Y2Y0 163 aa12.69□□□□□ -0.38
NME3-201ENST00000219302 TBL2Q9Y4P3 447 aaKnown RBP12.69□□□□□ -0.38
NME3-201ENST00000219302 PQLC2LA1A4F0 135 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 B2RBV5 119 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 K7N7A8 449 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 ZNF254O75437 659 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 CST1P01037 141 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 TTRP02766 147 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 RAP2AP10114 183 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 OSMP13725 252 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 MPZP25189 248 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 DYNLT3P51808 116 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 BLCAPP62952 87 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 SSX2Q16385 188 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 ZNF684Q5T5D7 378 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 ZNF626Q68DY1 528 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 ZNF679Q8IYX0 411 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 RPS4Y2Q8TD47 263 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 MROQ9BYG7 248 aa12.68□□□□□ -0.38
NME3-201ENST00000219302 COPS3Q9UNS2 423 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms