RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ZP1P60852 638 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 GMFBP60983 142 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 PDZK1IP1Q13113 114 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 ZNF525Q8N782 197 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 PNLDC1Q8NA58 520 aaKnown RBP22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 Q8TCH9 128 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 LRRC29Q8WV35 223 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 ISOC1Q96CN7 298 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 PKIBQ9C010 78 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 CNTD2Q9H8S5 307 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 BARX1Q9HBU1 254 aaPredicted RBP22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 TMEM106BQ9NUM4 274 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 C3orf80F5H4A9 247 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 TMEM225BP0DP42 221 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 IRF2P14316 349 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 MPZP25189 248 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 SERPINB10P48595 397 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 CAV3P56539 151 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 NR2C2APQ86WQ0 139 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 BOLLQ8N9W6 283 aaKnown RBP22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 SLAMF9Q96A28 289 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 ZNF488Q96MN9 340 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 POLDIP2Q9Y2S7 368 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 V9GY05 133 aa22.97■■□□□ 1.27
CHMP4B-201ENST00000217402 DPPA5A6NC42 116 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 LRRC30A6NM36 301 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 AKR7A2O43488 359 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 MRPS11P82912 194 aaKnown RBP22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 IL24Q13007 206 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 TPRA1Q86W33 373 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 LYPD6Q86Y78 171 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 NDNFQ8TB73 568 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 HPS1Q92902 700 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 MBD6Q96DN6 1003 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 RBM38Q9H0Z9 239 aaKnown RBP22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 PLGRKTQ9HBL7 147 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 DLL4Q9NR61 685 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 RNF7Q9UBF6 113 aa22.96■■□□□ 1.27
CHMP4B-201ENST00000217402 RP2O75695 350 aa22.95■■□□□ 1.26
CHMP4B-201ENST00000217402 CYB5AP00167 134 aa22.95■■□□□ 1.26
CHMP4B-201ENST00000217402 PTGFRP43088 359 aa22.95■■□□□ 1.26
CHMP4B-201ENST00000217402 CDH26Q8IXH8 852 aa22.95■■□□□ 1.26
CHMP4B-201ENST00000217402 OR4D6Q8NGJ1 314 aa22.95■■□□□ 1.26
CHMP4B-201ENST00000217402 OR51F2Q8NH61 342 aa22.95■■□□□ 1.26
CHMP4B-201ENST00000217402 FOXRED1Q96CU9 486 aaPredicted RBP22.95■■□□□ 1.26
CHMP4B-201ENST00000217402 DYSFO75923 2080 aa22.94■■□□□ 1.26
CHMP4B-201ENST00000217402 FAM201AQ5SY85 155 aa22.94■■□□□ 1.26
CHMP4B-201ENST00000217402 C1QL2Q7Z5L3 287 aa22.94■■□□□ 1.26
CHMP4B-201ENST00000217402 ZNF671Q8TAW3 534 aa22.94■■□□□ 1.26
CHMP4B-201ENST00000217402 UQCC2Q9BRT2 126 aa22.94■■□□□ 1.26
CHMP4B-201ENST00000217402 ELL3Q9HB65 397 aaPredicted RBP22.94■■□□□ 1.26
CHMP4B-201ENST00000217402 MTCH1Q9NZJ7 389 aa22.94■■□□□ 1.26
CHMP4B-201ENST00000217402 MRPS28Q9Y2Q9 187 aaKnown RBP22.94■■□□□ 1.26
CHMP4B-201ENST00000217402 TANC2Q9HCD6 1990 aa22.94■■□□□ 1.26
CHMP4B-201ENST00000217402 IGKV1-12A0A0C4DH73 117 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 ZNF205O95201 554 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 IGKV1D-12P01611 117 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 EGR1P18146 543 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 HES5Q5TA89 166 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 AWAT2Q6E213 333 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 MKXQ8IYA7 352 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 GCSAMQ8N6F7 178 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 SMURF1Q9HCE7 757 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 ARID1AO14497 2285 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 A0A0G2JK05 382 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 H3BMQ9 156 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 TMEM178BH3BS89 294 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 WNT9BO14905 357 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 RPS19P39019 145 aaKnown RBP22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 PSMD7P51665 324 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 ZNF181Q2M3W8 571 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 C19orf18Q8NEA5 215 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 BCL7BQ9BQE9 202 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 CHODLQ9H9P2 273 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 ING4Q9UNL4 249 aa22.93■■□□□ 1.26
CHMP4B-201ENST00000217402 IFNL4K9M1U5 179 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 PGA5P0DJD9 388 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 HTR2CP28335 458 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 CD80P33681 288 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 SPCS2Q15005 226 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 C1orf100Q5SVJ3 147 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 USP43Q70EL4 1123 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 C1orf87Q8N0U7 546 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 POC1AQ8NBT0 407 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 OR10Z1Q8NGY1 313 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 C12orf43Q96C57 262 aaKnown RBP22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 CEP19Q96LK0 163 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 S100A13Q99584 98 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 WDR13Q9H1Z4 485 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 DCSTAMPQ9H295 470 aa22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 MYOZ1Q9NP98 299 aaPredicted RBP22.92■■□□□ 1.26
CHMP4B-201ENST00000217402 SMIM31A0A1B0GVY4 71 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 NOTOA8MTQ0 251 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 CLDN25C9JDP6 229 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 F8VVB4 439 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 F8VWA3 439 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 TRAPPC2LH3BP13 241 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 SLC17A2O00624 439 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 SLC22A1O15245 554 aa22.91■■□□□ 1.26
CHMP4B-201ENST00000217402 IL1AP01583 271 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms