RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 K7ESF4 209 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 TM4SF1P30408 202 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 WNT3P56703 355 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 RNFT1Q5M7Z0 435 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 MMP17Q9ULZ9 603 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 MBTPS2O43462 519 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 DCTDP32321 178 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 PRSS8Q16651 343 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 C6orf15Q6UXA7 325 aaPredicted RBP13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 ANKLE1Q8NAG6 615 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 OR2G2Q8NGZ5 317 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 GMLQ99445 158 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 WSB1Q9Y6I7 421 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 CDRT15L2A8MXV6 281 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 F11P03951 625 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 Q6ZNX1 250 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC36A1Q7Z2H8 476 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 BCL7CQ8WUZ0 217 aaPredicted RBP13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 KISS1RQ969F8 398 aaPredicted RBP13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 PCYT2Q99447 389 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 PCOLCE2Q9UKZ9 415 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 TMEM30CPA0ZSE6 113 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 PPP1CAP62136 330 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 MRPS21P82921 87 aaKnown RBP13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 RIGQ13278 110 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 TMEM128Q5BJH2 165 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 VRK3Q8IV63 474 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 LKAAEAR1Q8TD35 194 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 WSB2Q9NYS7 404 aaPredicted RBP13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 TECRQ9NZ01 308 aaKnown RBP13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 R4GMQ9 66 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 FIGNL2A6NMB9 653 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC37A1P57057 533 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 FCRL6Q6DN72 434 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 TMEM38AQ9H6F2 299 aa13.18□□□□□ -0.3
SPTLC2-201ENST00000216484 NID2Q14112 1375 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 MFSD2BA6NFX1 497 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 SIAH2O43255 324 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 COA4Q9NYJ1 87 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 NAT8Q9UHE5 227 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 P01737 135 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 DUSP5Q16690 384 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 DNLZQ5SXM8 178 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC16A11Q8NCK7 471 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 OR5AU1Q8NGC0 362 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 ABHD3Q8WU67 409 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 TREX1Q9NSU2 369 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 TAAR3PQ9P1P4 343 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 IGKV6D-41A0A0C4DH26 115 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 FCGR3BO75015 233 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 POU3F3P20264 500 aaPredicted RBP13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 TCL1AP56279 114 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 ISL2Q96A47 359 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 THBS4P35443 961 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 LIM2P55344 173 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 TMEM215Q68D42 235 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 OLIG3Q7RTU3 272 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 TCFL5Q9UL49 500 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 ACTL6AO96019 429 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 OTUD1Q5VV17 481 aaPredicted RBP13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 ISG20L2Q9H9L3 353 aaKnown RBP13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 TMEM265A0A087WTH1 108 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 RPS4Y1P22090 263 aaKnown RBP13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 CACNG7P62955 275 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC38A11Q08AI6 406 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 IGFBP7Q16270 282 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 FBXO17Q96EF6 278 aa13.17□□□□□ -0.3
SPTLC2-201ENST00000216484 IFITM5A6NNB3 132 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 FAM157AC9JC47 383 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 SSX8Q7RTT4 187 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 AUNIPQ9H7T9 357 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 RAXQ9Y2V3 346 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 COL8A1P27658 744 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 RRN3P1Q2M238 152 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 DPPA3Q6W0C5 159 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 SPOCK3Q9BQ16 436 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 SLCO2B1O94956 709 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 ZBTB37Q5TC79 503 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 KTI12Q96EK9 354 aaPredicted RBP13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 SCMH1Q96GD3 660 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 RSG1Q9BU20 258 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 DUXBA0A1W2PPF3 345 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 GGTA1PQ4G0N0 100 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 LTB4R2Q9NPC1 389 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 EMCNQ9ULC0 261 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 K7EQS6 105 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 PPP1CCP36873 323 aaKnown RBP13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 HLA-DRB5Q30154 266 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 GABARAPL3Q9BY60 117 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 MBLAC1A4D2B0 266 aaPredicted RBP13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 B4GALT1P15291 398 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 MICBQ29980 383 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 FAM71E1Q6IPT2 247 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 SLC48A1Q6P1K1 146 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 FADS6Q8N9I5 356 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 KLK11Q9UBX7 282 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 PITPNC1Q9UKF7 332 aa13.16□□□□□ -0.3
SPTLC2-201ENST00000216484 CLDN34H7C241 214 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms