RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 MRGPRDQ8TDS7 321 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 HGDQ93099 445 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 TMEM204Q9BSN7 226 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 MS4A7Q9GZW8 240 aaPredicted RBP12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 AURKAIP1Q9NWT8 199 aaPredicted RBP12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 PCM1Q15154 2024 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 MBTPS2O43462 519 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 NPEPL1Q8NDH3 523 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 SPACA9Q96E40 222 aaPredicted RBP12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 DCAF16Q9NXF7 216 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 SPTY2D1-AS1A0A0U1RR47 76 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF628Q5EBL2 1059 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 OR5C1Q8NGR4 320 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 KCNE4Q8WWG9 221 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 GNPNAT1Q96EK6 184 aaPredicted RBP12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 GPR87Q9BY21 358 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 DLL4Q9NR61 685 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 GHRLQ9UBU3 117 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 SERTM1A2A2V5 107 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 KIAA1324LA8MWY0 1029 aaPredicted RBP12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 TRAPPC2P0DI81 140 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 TRAPPC2BP0DI82 140 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 SULT1A3P0DMM9 295 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 SULT1A4P0DMN0 295 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 GUK1Q16774 197 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 TIGITQ495A1 244 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 OR2D2Q9H210 308 aa12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 YBX2Q9Y2T7 364 aaKnown RBP12.14□□□□□ -0.47
TGFBR3-201ENST00000212355 IGHV3-21A0A0B4J1V1 117 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 C9orf170A2RU37 121 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 CTAG2O75638 210 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 IL5P05113 134 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 GALR1P47211 349 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 IL10RAQ13651 578 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 KIAA0040Q15053 153 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 Q1RN00 199 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 OR1A1Q9P1Q5 309 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF32P17041 273 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 COX5AP20674 150 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 MEOX1P50221 254 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 DSCR4P56555 118 aaPredicted RBP12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 GSG1Q2KHT4 349 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 NCMAPQ5T1S8 102 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 IL22RA2Q969J5 263 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 TAAR6Q96RI8 345 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 SLC2A8Q9NY64 477 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 SMCHD1A6NHR9 2005 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 BMPR1BO00238 502 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 DUS4LO95620 317 aaKnown RBP12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 EML2O95834 649 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 SRFP11831 508 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 CXCL3P19876 107 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 DHRS2Q13268 280 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 TPBGQ13641 420 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 BHLHA9Q7RTU4 235 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 ANKRD37Q7Z713 158 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 TRAV1-2A0A0B4J238 106 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 HTN1P15515 57 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 SPRED2Q7Z698 418 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 LINC00052Q96N35 136 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 RBM14Q96PK6 669 aaKnown RBP12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 ABHD1Q96SE0 405 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 LPAR6P43657 344 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 TCL1AP56279 114 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 MPPED2Q15777 294 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 TOMM20LQ6UXN7 152 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 DEFB124Q8NES8 71 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 DOK1Q99704 481 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 KCNIP2Q9NS61 270 aa12.13□□□□□ -0.47
TGFBR3-201ENST00000212355 MASP2O00187 686 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 SLC17A2O00624 439 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 CTXN2P0C2S0 81 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 CTLA4P16410 223 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 FUT6P51993 359 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF547Q8IVP9 402 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 DUSP18Q8NEJ0 188 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 TRPM3Q9HCF6 1732 aaPredicted RBP12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 BTBD17A6NE02 478 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 GEMIN2O14893 280 aaKnown RBP12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 TMEM128Q5BJH2 165 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF66Q6ZN08 573 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 OR1L4Q8NGR5 311 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 SIRT3Q9NTG7 399 aaPredicted RBP12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 PRR35P0CG20 571 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 TMIGD3P0DMS9 266 aaPredicted RBP12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 PCMT1P22061 227 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 CALCRP30988 508 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 ENDOGQ14249 297 aaKnown RBP12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 PABPC1L2AQ5JQF8 200 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 LINC00615Q96LM1 132 aaPredicted RBP12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 CYSLTR2Q9NS75 346 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 SNRPGP15A8MWD9 76 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 CBR3O75828 277 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 EPPINO95925 133 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 ZNF683Q8IZ20 524 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 ADAD2Q8NCV1 583 aaKnown RBP12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 MRGPRX3Q96LB0 322 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 GAL3ST2Q9H3Q3 398 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 CDRT15L2A8MXV6 281 aa12.12□□□□□ -0.47
TGFBR3-201ENST00000212355 TGOLN2O43493 480 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms