RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 NDRG3Q9UGV2 375 aa13.21□□□□□ -0.29
EFNB1-201ENST00000204961 C9JQL5 133 aa13.21□□□□□ -0.3
EFNB1-201ENST00000204961 GEMIN2O14893 280 aaKnown RBP13.21□□□□□ -0.3
EFNB1-201ENST00000204961 CXCL13O43927 109 aa13.21□□□□□ -0.3
EFNB1-201ENST00000204961 CXCL12P48061 93 aa13.21□□□□□ -0.3
EFNB1-201ENST00000204961 HOXA1P49639 335 aaPredicted RBP13.21□□□□□ -0.3
EFNB1-201ENST00000204961 Q6ZRG5 221 aa13.21□□□□□ -0.3
EFNB1-201ENST00000204961 P4HA3Q7Z4N8 544 aa13.21□□□□□ -0.3
EFNB1-201ENST00000204961 LYZL2Q7Z4W2 148 aa13.21□□□□□ -0.3
EFNB1-201ENST00000204961 PEG10Q86TG7 708 aaKnown RBP13.21□□□□□ -0.3
EFNB1-201ENST00000204961 HOGA1Q86XE5 327 aa13.21□□□□□ -0.3
EFNB1-201ENST00000204961 OR56B1Q8NGI3 324 aa13.21□□□□□ -0.3
EFNB1-201ENST00000204961 ARL11Q969Q4 196 aa13.21□□□□□ -0.3
EFNB1-201ENST00000204961 ZNF442Q9H7R0 627 aa13.21□□□□□ -0.3
EFNB1-201ENST00000204961 S100A6P06703 90 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 QRFPP83859 136 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 WIPI1Q5MNZ9 446 aaPredicted RBP13.2□□□□□ -0.3
EFNB1-201ENST00000204961 THRSPQ92748 146 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 PHF7Q9BWX1 381 aaPredicted RBP13.2□□□□□ -0.3
EFNB1-201ENST00000204961 MRPL13Q9BYD1 178 aaKnown RBP13.2□□□□□ -0.3
EFNB1-201ENST00000204961 CHRDQ9H2X0 955 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 RHOFQ9HBH0 211 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 BARX1Q9HBU1 254 aaPredicted RBP13.2□□□□□ -0.3
EFNB1-201ENST00000204961 FBXO7Q9Y3I1 522 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 ISG15P05161 165 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 OR8U9P0C7N5 309 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 CALCRP30988 508 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 FCGR2CP31995 323 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 PIGPP57054 158 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 FAM76BQ5HYJ3 339 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 FBXL14Q8N1E6 418 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 LINC00469Q8N7U9 141 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 PLPP5Q8NEB5 264 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 OR8U1Q8NH10 309 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 MAFAQ8NHW3 353 aaPredicted RBP13.2□□□□□ -0.3
EFNB1-201ENST00000204961 SFT2D1Q8WV19 159 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 ZNF845Q96IR2 970 aaPredicted RBP13.2□□□□□ -0.3
EFNB1-201ENST00000204961 RSRP1Q9BUV0 290 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 PECRQ9BY49 303 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 FAM117AQ9C073 453 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 UBE2ZQ9H832 354 aaPredicted RBP13.2□□□□□ -0.3
EFNB1-201ENST00000204961 GPR132Q9UNW8 380 aa13.2□□□□□ -0.3
EFNB1-201ENST00000204961 ONECUT2O95948 504 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 CD8AP01732 235 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 OR5H8P0DN80 308 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 OR13C7P0DN81 318 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 HTR5AP47898 357 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 ERGIC1Q969X5 290 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 EDEM2Q9BV94 578 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 PIGMQ9H3S5 423 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 LIME1Q9H400 295 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 FAM86C1Q9NVL1 165 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 BDP1A6H8Y1 2624 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 A0A0J9YW62 118 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 H3BP45 60 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 K7EPK0 472 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 SFT2D2O95562 160 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 APOC1P02654 83 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 CAV2P51636 162 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 IZUMO4Q1ZYL8 232 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 HLA-BQ31612 363 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 FAM71E2Q8N5Q1 922 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 FGFBP3Q8TAT2 258 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 OXGR1Q96P68 337 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 FBXL17Q9UF56 701 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 ARG1P05089 322 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 RFPL3SP0C7P2 107 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 PTGDSP41222 190 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 RGS19P49795 217 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 AADACL3Q5VUY0 350 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 SLC22A25Q6T423 547 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 FNDC9Q8TBE3 224 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 RNF141Q8WVD5 230 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 C1orf147Q96MC9 270 aaPredicted RBP13.19□□□□□ -0.3
EFNB1-201ENST00000204961 SRPK3Q9UPE1 567 aa13.19□□□□□ -0.3
EFNB1-201ENST00000204961 SPTA1P02549 2419 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 RAB19A4D1S5 217 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 S100A9P06702 114 aaKnown RBP13.18□□□□□ -0.3
EFNB1-201ENST00000204961 OR5AC1P0C628 307 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 EPHA1P21709 976 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 MSR1P21757 451 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 NTF4P34130 210 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 PLA2G5P39877 138 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 NHLH2Q02577 135 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 C3AR1Q16581 482 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 MARS2Q96GW9 593 aaKnown RBP13.18□□□□□ -0.3
EFNB1-201ENST00000204961 MRGPRX4Q96LA9 322 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 CCDC187A0A096LP49 1063 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 RPL12P30050 165 aaKnown RBP13.18□□□□□ -0.3
EFNB1-201ENST00000204961 TMEM33P57088 247 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 OR2B8PP59922 312 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 SMCO1Q147U7 214 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 AVPI1Q5T686 147 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 OR14K1Q8NGZ2 314 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 C14orf79Q96F83 325 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 SULT4A1Q9BR01 284 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 SH3BGRL3Q9H299 93 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 COA4Q9NYJ1 87 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 PKDREJQ9NTG1 2253 aa13.18□□□□□ -0.3
EFNB1-201ENST00000204961 ADAMTS9Q9P2N4 1935 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 288.7 ms