RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 COQ8AQ8NI60 647 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 THAP6Q8TBB0 222 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 MAFIPQ8WZ33 124 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 PIGCQ92535 297 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 EMG1Q92979 244 aaKnown RBP7.17□□□□□ -1.26
VAMP3-201ENST00000054666 MRPS24Q96EL2 167 aaKnown RBP7.17□□□□□ -1.26
VAMP3-201ENST00000054666 ACKR4Q9NPB9 350 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 ZNF230Q9UIE0 474 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-201ENST00000054666 EDARQ9UNE0 448 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 GPR132Q9UNW8 380 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 C14orf166Q9Y224 244 aaKnown RBP7.17□□□□□ -1.26
VAMP3-201ENST00000054666 TRAV14DV4A0A0A6YYC5 116 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 KANTRA0A1W2PQU2 76 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 B3GALNT1O75752 331 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 CD79AP11912 226 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 PGAM2P15259 253 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 ARR3P36575 388 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 ZNF345Q14585 488 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 SURF2Q15527 256 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-201ENST00000054666 C3AR1Q16581 482 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 TAF9Q16594 264 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 ZNF766Q5HY98 468 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 C11orf87Q6NUJ2 197 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.17□□□□□ -1.26
VAMP3-201ENST00000054666 SLC51BQ86UW2 128 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 LHFPL1Q86WI0 220 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 OSR2Q8N2R0 312 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 TMEM185AQ8NFB2 350 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 PXT1Q8NFP0 134 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 OR13G1Q8NGZ3 307 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 SCARB1Q8WTV0 552 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 PPP1R1CQ8WVI7 109 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 NANOS1Q8WY41 292 aaKnown RBP7.17□□□□□ -1.26
VAMP3-201ENST00000054666 SPSB4Q96A44 273 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 CMSS1Q9BQ75 279 aaKnown RBP7.17□□□□□ -1.26
VAMP3-201ENST00000054666 PAPOLGQ9BWT3 736 aaKnown RBP7.17□□□□□ -1.26
VAMP3-201ENST00000054666 C5orf66Q9H5L9 145 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 FN3KRPQ9HA64 309 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 IL36GQ9NZH8 169 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 KIF25Q9UIL4 384 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 HSF4Q9ULV5 492 aa7.17□□□□□ -1.26
VAMP3-201ENST00000054666 IGKV1-27A0A075B6S5 117 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 C5orf49A4QMS7 147 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 EEF1E1-BLOC1S5C9J1V9 151 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 SDCBPO00560 298 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-201ENST00000054666 OR2F2O95006 317 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 SFT2D2O95562 160 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 HLA-HP01893 362 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 SLC25A4P12235 298 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DTYMKP23919 212 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 UBA52P62987 128 aaKnown RBP7.16□□□□□ -1.26
VAMP3-201ENST00000054666 CYCSP99999 105 aaKnown RBP7.16□□□□□ -1.26
VAMP3-201ENST00000054666 CAMK2BQ13554 666 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 OR2F1Q13607 317 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 NHLRC3Q5JS37 347 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 ATP1A1-AS1Q5TC04 95 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 TMEM65Q6PI78 240 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 CPEB3Q8NE35 698 aaKnown RBP7.16□□□□□ -1.26
VAMP3-201ENST00000054666 OR56B2PQ8NGI1 322 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 APOBEC3DQ96AK3 386 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-201ENST00000054666 SEC22AQ96IW7 307 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 OPA3Q9H6K4 179 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 OSGIN2Q9Y236 505 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 LIPGQ9Y5X9 500 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 AUP1Q9Y679 476 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 MED13Q9UHV7 2174 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DNAJC13O75165 2243 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 PCNX2A6NKB5 2137 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 TRGV5A0A0B4J1U4 118 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 A0A0B4J2A0 478 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 C13orf42A0A1B0GVH6 325 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 A0A1B0GW55 424 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 FIGNL2A6NMB9 653 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 RRP8O43159 456 aaKnown RBP7.16□□□□□ -1.26
VAMP3-201ENST00000054666 FTH1P19P0C7X4 201 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DUX4L2P0CJ85 424 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DUX4L3P0CJ86 424 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DUX4L4P0CJ87 422 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DUX4L5P0CJ88 424 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DUX4L6P0CJ89 424 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DUX4L7P0CJ90 424 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 CHATP28329 748 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 PDZK1IP1Q13113 114 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 BAMBIQ13145 260 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 SLC9A3R2Q15599 337 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 PLEKHN1Q494U1 663 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-201ENST00000054666 RPUSD3Q6P087 351 aaKnown RBP7.16□□□□□ -1.26
VAMP3-201ENST00000054666 ASCL4Q6XD76 172 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 COLCA1Q6ZS62 124 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 OVCH2Q7RTZ1 564 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DPPA2Q7Z7J5 298 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 INO80EQ8NBZ0 244 aaPredicted RBP7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DEFB124Q8NES8 71 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 OR6K3Q8NGY3 331 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DEFB127Q9H1M4 99 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 DUX4Q9UBX2 424 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 SHPKQ9UHJ6 478 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 ST3GAL6Q9Y274 331 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 ZNF407Q9C0G0 2248 aa7.16□□□□□ -1.26
VAMP3-201ENST00000054666 SLC22A20A6NK97 555 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms