RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gm765B2RVL9 189 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 P2rx1P51576 399 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Kcnj3P63250 501 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ttyh2Q3TH73 532 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 H2-M10.3Q85ZW6 330 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr96Q8VFE3 313 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr54Q8VFE6 313 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rnaseh2cQ9CQ18 166 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 AI182371A2AS37 356 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ctdsp1P58466 261 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 EbpP70245 230 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm10696Q3UTC4 357 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr453Q7TRV7 317 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Lmf2Q8C3X8 702 aaKnown RBP15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 SccpdhQ8R127 429 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Tubd1Q9R1K7 455 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Angptl4Q9Z1P8 410 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1124A2AT86 318 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 St6gal2Q76K27 524 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Clec9aQ8BRU4 238 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rdh16f2Q8K3M1 318 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Vmn1r211Q8R266 298 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 GhsrQ99P50 364 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Slc25a30Q9CR58 291 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Gm11168J3QN50 228 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Lhx4P53776 390 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 B4galnt2Q09199 510 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Ear6Q923L7 155 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1320A2AHM8 319 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Nupl2Q8CIC2 420 aaKnown RBP15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Spns1Q8R0G7 528 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Olfr1294Q8VGE5 312 aa15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Rpl7l1Q9D8M4 246 aaKnown RBP15.15■□□□□ 0.02
Ccdc88a-201ENSMUST00000040182 Marf1Q8BJ34 1730 aaKnown RBP15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Sptan1P16546 2472 aaKnown RBP15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm35060A0A140LIV7 231 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Dgat2l6A2ADU8 337 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Dnmt3bO88509 859 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Abcd3P55096 659 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Nhp2Q9CRB2 153 aaKnown RBP15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Arl13aQ9D416 372 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Znrf4Q9DAH2 327 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Sp6Q9ESX2 376 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 GmlE9PX31 176 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Timp2P25785 220 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Cd300lbQ3U497 209 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Xkr7Q5GH64 580 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Vmn1r230Q8R2A2 316 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gbx1P82976 418 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Foxk2Q3UCQ1 651 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm14851Q5ERJ0 116 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Sez6Q7TSK2 991 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr488Q8VG02 314 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Chrm5Q920H4 532 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 St8sia2O35696 375 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Hes1P35428 282 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Paqr9Q6TCG2 375 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Alkal2Q80UG6 151 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr38Q8VGP4 317 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 PbkQ9JJ78 330 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 PthQ9Z0L6 115 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1338A2ACY7 313 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm4907B1AXB9 411 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Zfp944E9PUS4 492 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Dnmt3lQ9CWR8 421 aaKnown RBP15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Zfp493E9Q1L8 384 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 PkibQ04758 92 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Elavl4Q61701 385 aaKnown RBP15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Paqr8Q80ZE5 354 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Fbxo48Q8CAT8 161 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1377Q8VGH1 307 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Atp5sQ9CRA7 200 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olig2Q9EQW6 323 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Prss27Q8BJR6 328 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 PxnQ8VI36 591 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gpx8Q9D7B7 209 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Nkain4Q9JMG4 208 aa15.14■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm21738J3QP72 227 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Bmpr1aP36895 532 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rhox4gQ2MDF7 205 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Fbxo27Q6DIA9 280 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Adam26bQ6IMH6 699 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Slc35e1Q8CD26 409 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 RfesdQ8K2P6 157 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Enpp5Q9EQG7 477 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Mllt1Q9ERL0 547 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm20489A2AGH5 449 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Emp3O35912 163 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Taar2Q5QD17 339 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Ndufv3Q8BK30 104 aaKnown RBP15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Fxyd4Q9D2W0 88 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1095A3KPP7 308 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Q0VG62 139 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 SelplgQ62170 397 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Zfp975Q6NVD6 525 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Rfpl4aQ8VH31 287 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Taf1Q80UV9 1891 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Gm5890A0A140LI04 305 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Olfr1015Q7TR94 312 aa15.13■□□□□ 0.01
Ccdc88a-201ENSMUST00000040182 Clec4a1Q80UI7 245 aa15.13■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms