RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 NppcQ61839 126 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Znf629Q6A085 867 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr645Q7TRQ1 315 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Fam212bQ80VY2 300 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Nrn1lQ8C4W3 162 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Sirt4Q8R216 333 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 V1ra11Q8R2E6 318 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vmn1r45Q8VIC7 318 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Snx18Q91ZR2 614 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Atp5sQ9CRA7 200 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ankrd22Q9D3J5 191 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Asf1bQ9DAP7 202 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Zfp300A2AE21 645 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Rnf39A2RT81 352 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 A6H6Q4 206 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr69E9Q7C5 316 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Esp8F7AMQ8 149 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Slc38a6G3UVW3 457 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1218L7MU54 311 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vmn1r80L7N1Z3 308 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr224M9MMJ7 314 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 PrkacaP05132 351 aaKnown RBP9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Hsf1P38532 525 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Wnt11P48615 354 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Fam196aQ3USH1 422 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Fzd8Q61091 685 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tas2r113Q7M711 309 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1286Q7TQY2 305 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr453Q7TRV7 317 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Lrp12Q8BUJ9 858 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Scgb2b26Q8JZX1 112 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Rfc3Q8R323 356 aaKnown RBP9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Mitd1Q8VDV8 249 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Thoc3Q8VE80 351 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr919Q8VF78 315 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gpx6Q91WR8 221 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tmem70Q921N7 253 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 CmipQ9D486 773 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 PipoxQ9D826 390 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tex33Q9D9J2 266 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tas2r4Q9JKT3 297 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Slc37a2Q9WU81 501 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Psme4Q5SSW2 1843 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ighv6-6A0A075B5T3 119 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1532-ps1A0A0R4J8U2 307 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1410E9PYK6 323 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr707K7N662 307 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr117L7N1Z1 317 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 P03976 113 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Egr3P43300 387 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Abcd3P55096 659 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gpr143P70259 405 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ltc4sQ60860 150 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 G6pc3Q6NSQ9 346 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gpr173Q6PI62 373 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Zdhhc25Q810M4 279 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Pcyt1bQ811Q9 369 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Stk17bQ8BG48 372 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm5447Q8BPB2 115 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vmn1r8Q8R2C2 303 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr130Q8VFC1 317 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr473Q8VG44 310 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Slc7a12Q8VIE6 465 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cx3cr1Q9Z0D9 354 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Brca1P48754 1812 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Cdc20bD3Z3I0 519 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm43191F6YIH5 235 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 ArntP53762 791 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Dus4lQ32M08 324 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Dhrs11Q3U0B3 260 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Zfp235Q499D5 702 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 St8sia3Q64689 380 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1087Q7TR63 313 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Slc24a5Q8C261 501 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1466Q8VFW4 310 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr584Q8VGW0 319 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 SdhbQ9CQA3 282 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 AicdaQ9WVE0 198 aa9.29□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ighv1-43A0A0A6YXN5 117 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Emg1O35130 244 aaKnown RBP9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 P01667 111 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Fcer1aP20489 250 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ube2mP61082 183 aaKnown RBP9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 S100a3P62818 101 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Acsf3Q3URE1 583 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tnfrsf8Q60846 498 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Coq3Q8BMS4 370 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Fam120cQ8C3F2 1091 aaKnown RBP9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr1241Q8VF91 314 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr56Q8VGD6 315 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 QprtQ91X91 299 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 B3galnt1Q920V1 331 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Lcn8Q924P3 175 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Q9CRC3 126 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Tomm34Q9CYG7 309 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Olfr878Q9EQA9 314 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Ak3Q9WTP7 227 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Mecp2Q9Z2D6 484 aaKnown RBP9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Gm436B1AVU6 407 aa9.28□□□□□ -0.92
Ccdc40-201ENSMUST00000035935 Vmn1r174E9PYW5 313 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms