RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PRR13Q9NZ81 148 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 KMT2EQ8IZD2 1858 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 IGKV3D-15A0A087WSY6 115 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 IGKV1D-8A0A087WSZ0 117 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 hCG_38984A0A1B0GV85 526 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 DHRS7CA6NNS2 312 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 POM121CA8CG34 1229 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 ZNF587BE7ETH6 402 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 MSTNO14793 375 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 CBX5P45973 191 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 ATP1B3P54709 279 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 PCBD1P61457 104 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 ARF1P84077 181 aaKnown RBP14.74□□□□□ -0.05
PHGDH-229ENST00000641891 FAM3AP98173 230 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 PLGLB1Q02325 96 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 LPCAT3Q6P1A2 487 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 FAHD2BQ6P2I3 314 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-229ENST00000641891 ZNF546Q86UE3 836 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 ARRDC1Q8N5I2 433 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 FNDC9Q8TBE3 224 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 SPSB1Q96BD6 273 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 FAHD2AQ96GK7 314 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 ZNF701Q9NV72 531 aaPredicted RBP14.74□□□□□ -0.05
PHGDH-229ENST00000641891 GPR132Q9UNW8 380 aa14.74□□□□□ -0.05
PHGDH-229ENST00000641891 NRASP01111 189 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 ZNF708P17019 499 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 AIMP2Q13155 320 aaKnown RBP14.73□□□□□ -0.05
PHGDH-229ENST00000641891 CAMK2BQ13554 666 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 ATXN7L3Q14CW9 347 aaPredicted RBP14.73□□□□□ -0.05
PHGDH-229ENST00000641891 SIGIRRQ6IA17 410 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 PPP1R1CQ8WVI7 109 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 TMEM9BQ9NQ34 198 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 EHFQ9NZC4 300 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 MED13Q9UHV7 2174 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 LINC01387J3KSC0 135 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 DUS4LO95620 317 aaKnown RBP14.73□□□□□ -0.05
PHGDH-229ENST00000641891 OR3A2P47893 321 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 RSU1Q15404 277 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 CNN3Q15417 329 aaKnown RBP14.73□□□□□ -0.05
PHGDH-229ENST00000641891 AADACL3Q5VUY0 350 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 COQ8AQ8NI60 647 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 METTL9Q9H1A3 318 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 PLEKHJ1Q9NW61 149 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 RDH8Q9NYR8 311 aa14.73□□□□□ -0.05
PHGDH-229ENST00000641891 FIGNL2A6NMB9 653 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 SERPINE3A8MV23 424 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 EEF1E1-BLOC1S5C9J1V9 151 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 SNAPC5O75971 98 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 FARS2O95363 451 aaKnown RBP14.72□□□□□ -0.05
PHGDH-229ENST00000641891 SERPINA5P05154 406 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 ZNF24P17028 368 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 HLA-GP17693 338 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 MPGP29372 298 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 MEOX1P50221 254 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 SLC9A3R2Q15599 337 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 TAF9Q16594 264 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 TMEM42Q69YG0 159 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 C11orf87Q6NUJ2 197 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 LHFPL1Q86WI0 220 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 BORCS8Q96FH0 119 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 CXorf58Q96LI9 332 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 CDC6Q99741 560 aa14.72□□□□□ -0.05
PHGDH-229ENST00000641891 IGKV1-12A0A0C4DH73 117 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 ZNF503-AS2A6NEH8 195 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 B3GALNT1O75752 331 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 SPDEFO95238 335 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 IGKV1D-12P01611 117 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 ZNF806P0C7X5 589 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 CCL2P13500 99 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 RBP2P50120 134 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 ZNF660Q6AZW8 331 aaPredicted RBP14.71□□□□□ -0.05
PHGDH-229ENST00000641891 IL22RA1Q8N6P7 574 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 RTBDNQ9BSG5 229 aaPredicted RBP14.71□□□□□ -0.05
PHGDH-229ENST00000641891 FAAP24Q9BTP7 215 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 OSGIN2Q9Y236 505 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 LIPGQ9Y5X9 500 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 C13orf42A0A1B0GVH6 325 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 DBX1A6NMT0 343 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 I3L521 148 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 SYNGR4O95473 234 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 HLA-HP01893 362 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 CSTBP04080 98 aaKnown RBP14.71□□□□□ -0.05
PHGDH-229ENST00000641891 SP1P08047 785 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 RRASP10301 218 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 PRKACBP22694 351 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 TAS2R31P59538 309 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 FGL1Q08830 312 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 SPEM2Q0P670 501 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 BEX5Q5H9J7 111 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 MOB3CQ70IA8 216 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 OR5AP2Q8NGF4 316 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 PIGCQ92535 297 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 DYRK2Q92630 601 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 EMG1Q92979 244 aaKnown RBP14.71□□□□□ -0.05
PHGDH-229ENST00000641891 DMRTA2Q96SC8 542 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 PPA2Q9H2U2 334 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 COMMD9Q9P000 198 aa14.71□□□□□ -0.05
PHGDH-229ENST00000641891 CEACAM18A8MTB9 384 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 KCNAB3O43448 404 aa14.7□□□□□ -0.06
PHGDH-229ENST00000641891 ZNF250P15622 560 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms