RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 NPFFO15130 113 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 MAGEB4O15481 346 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-211ENST00000641009 MITFO75030 526 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-211ENST00000641009 IGLV3-1P01715 115 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 PSG2P11465 335 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 RIDAP52758 137 aaKnown RBP11.41□□□□□ -0.58
LINC00339-211ENST00000641009 CAV3P56539 151 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 KRTAP10-3P60369 221 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 RPL15P61313 204 aaKnown RBP11.41□□□□□ -0.58
LINC00339-211ENST00000641009 GUCA2AQ02747 115 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 RIPPLY1Q0D2K3 151 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 TAF9Q16594 264 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 PLCXD3Q63HM9 321 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 HAGHLQ6PII5 290 aaPredicted RBP11.41□□□□□ -0.58
LINC00339-211ENST00000641009 BRICD5Q6PL45 260 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 MOB3CQ70IA8 216 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 THAP5Q7Z6K1 395 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 ZNRF1Q8ND25 227 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 AQP3Q92482 292 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 TNFRSF14Q92956 283 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 UTP4Q969X6 686 aaKnown RBP11.41□□□□□ -0.58
LINC00339-211ENST00000641009 CNN2Q99439 309 aaKnown RBP11.41□□□□□ -0.58
LINC00339-211ENST00000641009 DPAGT1Q9H3H5 408 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 ZNRD1Q9P1U0 126 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 GTF2A1LQ9UNN4 478 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 PIGLQ9Y2B2 252 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 RNF114Q9Y508 228 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 TMEM14AQ9Y6G1 99 aa11.41□□□□□ -0.58
LINC00339-211ENST00000641009 GSC2O15499 205 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 ZNF254O75437 659 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 TTRP02766 147 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 FBP1P09467 338 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 ATP6V1B1P15313 513 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 EEF1B2P24534 225 aaKnown RBP11.4□□□□□ -0.58
LINC00339-211ENST00000641009 EPHA2P29317 976 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 ZNF829Q3KNS6 432 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-211ENST00000641009 PLEKHG7Q6ZR37 379 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 OR5A2Q8NGI9 324 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 OR5K1Q8NHB7 308 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 LINC01006Q8NI28 216 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 NPRL2Q8WTW4 380 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 ASB17Q8WXJ9 295 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 DUS3LQ96G46 650 aaKnown RBP11.4□□□□□ -0.58
LINC00339-211ENST00000641009 CITED1Q99966 193 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 APOL4Q9BPW4 351 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 CADM1Q9BY67 442 aaKnown RBP11.4□□□□□ -0.58
LINC00339-211ENST00000641009 NUFIP1Q9UHK0 495 aaKnown RBP11.4□□□□□ -0.58
LINC00339-211ENST00000641009 ZNF222Q9UK12 451 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 CAB39Q9Y376 341 aaPredicted RBP11.4□□□□□ -0.58
LINC00339-211ENST00000641009 MAB21L2Q9Y586 359 aa11.4□□□□□ -0.58
LINC00339-211ENST00000641009 OR5B21A6NL26 309 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 SRSF10O75494 262 aaKnown RBP11.39□□□□□ -0.59
LINC00339-211ENST00000641009 SAA4P35542 130 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 CXCR4P61073 352 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 ESRRGP62508 458 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 ZNF322Q6U7Q0 402 aaPredicted RBP11.39□□□□□ -0.59
LINC00339-211ENST00000641009 MEPCEQ7L2J0 689 aaKnown RBP11.39□□□□□ -0.59
LINC00339-211ENST00000641009 TCEANCQ8N8B7 351 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 TMEM185AQ8NFB2 350 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 ZNF671Q8TAW3 534 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 ZNF488Q96MN9 340 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 ADGRL4Q9HBW9 690 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 KRT84Q9NSB2 600 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 FAM53CQ9NYF3 392 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 ENPP5Q9UJA9 477 aa11.39□□□□□ -0.59
LINC00339-211ENST00000641009 TET2Q6N021 2002 aaPredicted RBP11.39□□□□□ -0.59
LINC00339-211ENST00000641009 MEIOCA2RUB1 952 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 A6NIN4 97 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 LOC110117498-PIK3R3F6TDL0 507 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 M0R1W7 72 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 DHRS3O75911 302 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 NRASP01111 189 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 EFNB1P98172 346 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 ZNF684Q5T5D7 378 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 ZBTB37Q5TC79 503 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 AADACL4Q5VUY2 407 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 GDPGP1Q6ZNW5 385 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 C1orf122Q6ZSJ8 110 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 Q6ZSV7 163 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 SLC35F2Q8IXU6 374 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 FAM185AQ8N0U4 392 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 LRTOMTQ8WZ04 291 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 IL4I1Q96RQ9 567 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 PRRG3Q9BZD7 231 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 METTL8Q9H825 291 aaKnown RBP11.38□□□□□ -0.59
LINC00339-211ENST00000641009 GPR173Q9NS66 373 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 VPREB3Q9UKI3 123 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 PRKDCP78527 4128 aaKnown RBP11.38□□□□□ -0.59
LINC00339-211ENST00000641009 BTBD17A6NE02 478 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 SLC22A31A6NKX4 558 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 RFPL4AA6NLU0 287 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 ZAR1LA6NP61 321 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 RFPL4AL1F8VTS6 287 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 G3V2T6 193 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 SYNGR1O43759 233 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 PAHP00439 452 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 HAAOP46952 286 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 CEBPDP49716 269 aaPredicted RBP11.38□□□□□ -0.59
LINC00339-211ENST00000641009 UBE2E1P51965 193 aa11.38□□□□□ -0.59
LINC00339-211ENST00000641009 CAPZA1P52907 286 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms