RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 POLR2IP36954 125 aaKnown RBP20.8■□□□□ 0.92
VEGFA-232ENST00000640653 ZNF684Q5T5D7 378 aa20.8■□□□□ 0.92
VEGFA-232ENST00000640653 C16orf87Q6PH81 154 aa20.8■□□□□ 0.92
VEGFA-232ENST00000640653 OR8J1Q8NGP2 316 aa20.8■□□□□ 0.92
VEGFA-232ENST00000640653 TMIGD2Q96BF3 282 aa20.8■□□□□ 0.92
VEGFA-232ENST00000640653 GAFA1Q96PS6 74 aa20.8■□□□□ 0.92
VEGFA-232ENST00000640653 DCTN5Q9BTE1 182 aa20.8■□□□□ 0.92
VEGFA-232ENST00000640653 ACOXLQ9NUZ1 547 aa20.8■□□□□ 0.92
VEGFA-232ENST00000640653 OR2AT4A6NND4 320 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 OR2T7P0C7T2 308 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 CLVS2Q5SYC1 327 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 HAGHLQ6PII5 290 aaPredicted RBP20.79■□□□□ 0.92
VEGFA-232ENST00000640653 Q6YL49 198 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 PLEKHG7Q6ZR37 379 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 ASRGL1Q7L266 308 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 VMO1Q7Z5L0 202 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 KIR3DL3Q8N743 410 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 YIPF7Q8N8F6 280 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 OR2T27Q8NH04 317 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 SGMS2Q8NHU3 365 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 PYDC1Q8WXC3 89 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 AQP3Q92482 292 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 H1FXQ92522 213 aaKnown RBP20.79■□□□□ 0.92
VEGFA-232ENST00000640653 TBX5Q99593 518 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 SLC25A10Q9UBX3 287 aaPredicted RBP20.79■□□□□ 0.92
VEGFA-232ENST00000640653 V9GYS6 101 aa20.79■□□□□ 0.92
VEGFA-232ENST00000640653 SIGLEC5O15389 551 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 ACAA1P09110 424 aaPredicted RBP20.78■□□□□ 0.92
VEGFA-232ENST00000640653 SELLP14151 372 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 ATP6V1E1P36543 226 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 CDC42P60953 191 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 TMED1Q13445 227 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 DMRTC1Q5HYR2 192 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 TMEM86BQ8N661 226 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 C8orf46Q8TAG6 207 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 RFKQ969G6 155 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 ZNF747Q9BV97 191 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 PCDHGB1Q9Y5G3 927 aa20.78■□□□□ 0.92
VEGFA-232ENST00000640653 DHRS7CA6NNS2 312 aa20.77■□□□□ 0.92
VEGFA-232ENST00000640653 DLGAP1O14490 977 aa20.77■□□□□ 0.92
VEGFA-232ENST00000640653 RPP14O95059 124 aaKnown RBP20.77■□□□□ 0.92
VEGFA-232ENST00000640653 GABRA2P47869 451 aa20.77■□□□□ 0.92
VEGFA-232ENST00000640653 DGUOKQ16854 277 aa20.77■□□□□ 0.92
VEGFA-232ENST00000640653 SSX6Q7RTT6 188 aa20.77■□□□□ 0.92
VEGFA-232ENST00000640653 ZNF573Q86YE8 665 aa20.77■□□□□ 0.92
VEGFA-232ENST00000640653 OR10H4Q8NGA5 316 aa20.77■□□□□ 0.92
VEGFA-232ENST00000640653 RASL12Q9NYN1 266 aa20.77■□□□□ 0.92
VEGFA-232ENST00000640653 ORC6Q9Y5N6 252 aa20.77■□□□□ 0.92
VEGFA-232ENST00000640653 A0A1B0GTI1 187 aa20.76■□□□□ 0.91
VEGFA-232ENST00000640653 A0A1W2PQL4 384 aaPredicted RBP20.76■□□□□ 0.91
VEGFA-232ENST00000640653 PSG2P11465 335 aa20.76■□□□□ 0.91
VEGFA-232ENST00000640653 NDUFB7P17568 137 aa20.76■□□□□ 0.91
VEGFA-232ENST00000640653 CAV3P56539 151 aa20.76■□□□□ 0.91
VEGFA-232ENST00000640653 TMEM42Q69YG0 159 aa20.76■□□□□ 0.91
VEGFA-232ENST00000640653 CCDC121Q6ZUS5 278 aa20.76■□□□□ 0.91
VEGFA-232ENST00000640653 OR14K1Q8NGZ2 314 aa20.76■□□□□ 0.91
VEGFA-232ENST00000640653 GPR173Q9NS66 373 aa20.76■□□□□ 0.91
VEGFA-232ENST00000640653 POMT1Q9Y6A1 747 aa20.76■□□□□ 0.91
VEGFA-232ENST00000640653 METTL15A6NJ78 407 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 APOL3O95236 402 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 TFF1P04155 84 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 MELTFP08582 738 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 HAAOP46952 286 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 ZFP1Q6P2D0 407 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 METAP1DQ6UB28 335 aaPredicted RBP20.75■□□□□ 0.91
VEGFA-232ENST00000640653 SHISA2Q6UWI4 295 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 Q6ZSR3 168 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 PDZD9Q8IXQ8 264 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 POC1AQ8NBT0 407 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 SSMEM1Q8WWF3 244 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 TRUB1Q8WWH5 349 aaKnown RBP20.75■□□□□ 0.91
VEGFA-232ENST00000640653 EME1Q96AY2 570 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 UNKLQ9H9P5 680 aaKnown RBP20.75■□□□□ 0.91
VEGFA-232ENST00000640653 TNFRSF19Q9NS68 423 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 IMPAD1Q9NX62 359 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.75■□□□□ 0.913e-7■■□□□ 12.6
VEGFA-232ENST00000640653 SLC22A13Q9Y226 551 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 POLDIP2Q9Y2S7 368 aa20.75■□□□□ 0.91
VEGFA-232ENST00000640653 TENM1Q9UKZ4 2725 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 IGKV1D-17A0A075B6S4 117 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 J3QT63 122 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 SULT1C4O75897 302 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 CCL1P22362 96 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 GUCA2AQ02747 115 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 SMIM21Q3B7S5 101 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 CATSPERDQ86XM0 798 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 TBC1D15Q8TC07 691 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 NPRL2Q8WTW4 380 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 PLEKHA1Q9HB21 404 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 SIRT7Q9NRC8 400 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 ZNF222Q9UK12 451 aa20.74■□□□□ 0.91
VEGFA-232ENST00000640653 A0A0U1RQK1 487 aa20.73■□□□□ 0.91
VEGFA-232ENST00000640653 A0A1W2PQ09 198 aa20.73■□□□□ 0.91
VEGFA-232ENST00000640653 POM121CA8CG34 1229 aa20.73■□□□□ 0.91
VEGFA-232ENST00000640653 ALPLP05186 524 aa20.73■□□□□ 0.91
VEGFA-232ENST00000640653 CRYBA1P05813 215 aa20.73■□□□□ 0.91
VEGFA-232ENST00000640653 KPNB1Q14974 876 aaKnown RBP20.73■□□□□ 0.91
VEGFA-232ENST00000640653 ACP7Q6ZNF0 438 aa20.73■□□□□ 0.91
VEGFA-232ENST00000640653 FAM220AQ7Z4H9 259 aa20.73■□□□□ 0.91
VEGFA-232ENST00000640653 TMEM185AQ8NFB2 350 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms