RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 NME2P1O60361 137 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 IGHV3-9P01782 118 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 SFTA3P0C7M3 94 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 FCGR2CP31995 323 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 FLI1Q01543 452 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-221ENST00000640341 PJVKQ0ZLH3 352 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 ECH1Q13011 328 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 RSU1Q15404 277 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 ZNF529Q6P280 563 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 UQCC3Q6UW78 93 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 Q6ZRG5 221 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 SGPP2Q8IWX5 399 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 OR5T2Q8NGG2 359 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 AKR1E2Q96JD6 320 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 SNAPINO95295 136 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 LCATP04180 440 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 CPT2P23786 658 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 GRB2P62993 217 aaKnown RBP12.79□□□□□ -0.36
SCARB2-221ENST00000640341 TGIF1Q15583 401 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 ACTBL2Q562R1 376 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 GJC3Q8NFK1 279 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 OR5L1Q8NGL2 311 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 OR10Z1Q8NGY1 313 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 SULT4A1Q9BR01 284 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 PIGQQ9BRB3 760 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCARB2-221ENST00000640341 FBXL17Q9UF56 701 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 MEMO1Q9Y316 297 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 PCDHGA1Q9Y5H4 931 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 NCOR1O75376 2440 aa12.79□□□□□ -0.36
SCARB2-221ENST00000640341 FAM157CP0CG43 387 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 PET100P0DJ07 73 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 CCL3P10147 92 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 ABCA11PQ4W5N1 156 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 WDR74Q6RFH5 385 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-221ENST00000640341 RABEPKQ7Z6M1 372 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 LINC00518Q8N0U6 118 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 CCDC74BQ96LY2 380 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 ALKBH3Q96Q83 286 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-221ENST00000640341 OCSTAMPQ9BR26 566 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 MMP26Q9NRE1 261 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 DKKL1Q9UK85 242 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 F8VVB4 439 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 F8VWA3 439 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 FGF16O43320 207 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 C1QL1O75973 258 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 IFNA21P01568 189 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 PRH1P02810 166 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 OR5H8P0DN80 308 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 SPP1P10451 314 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 MSX1P28360 303 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 FHITP49789 147 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 NOVA1P51513 510 aaKnown RBP12.78□□□□□ -0.36
SCARB2-221ENST00000640341 PIGPP57054 158 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 AKR7LQ8NHP1 331 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 MR1Q95460 341 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 COL4A2P08572 1712 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 DHRS3O75911 302 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 OR8U9P0C7N5 309 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 GSK3AP49840 483 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 TMEM33P57088 247 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 MEX3BQ6ZN04 569 aaKnown RBP12.78□□□□□ -0.36
SCARB2-221ENST00000640341 OR8U1Q8NH10 309 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 OR6S1Q8NH40 331 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 SLC5A7Q9GZV3 580 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 OSGIN2Q9Y236 505 aa12.78□□□□□ -0.36
SCARB2-221ENST00000640341 PTRH2Q9Y3E5 179 aaKnown RBP12.78□□□□□ -0.36
SCARB2-221ENST00000640341 AQP7P3A6NL99 342 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 CRYBA1P05813 215 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 DAOP14920 347 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 CCNOP22674 350 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 MPZP25189 248 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 CEBPGP53567 150 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 SLC35A1P78382 337 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 HFEQ30201 348 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 RAB11FIP2Q7L804 512 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 HSD17B11Q8NBQ5 300 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 SECTM1Q8WVN6 248 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 EMG1Q92979 244 aaKnown RBP12.77□□□□□ -0.36
SCARB2-221ENST00000640341 FBXO17Q96EF6 278 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 NRIP2Q9BQI9 281 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 TGIF2Q9GZN2 237 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 C1orf123Q9NWV4 160 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 PADI1Q9ULC6 663 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 KNTC1P50748 2209 aa12.77□□□□□ -0.36
SCARB2-221ENST00000640341 IGHV5-10-1A0A0J9YXX1 117 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 NPIPB13A6NJU9 1138 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 NPIPB4C9JG80 1138 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 C9JQL5 133 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 RNASEK-C17orf49H0YIS7 233 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 TP53I11O14683 189 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 CD79AP11912 226 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 PNLIPRP3Q17RR3 467 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 MST1LQ2TV78 715 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 C9orf135Q5VTT2 229 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 GGNBP1Q5YKI7 109 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 YRDCQ86U90 279 aaKnown RBP12.77□□□□□ -0.37
SCARB2-221ENST00000640341 POC1AQ8NBT0 407 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 GPHA2Q96T91 129 aa12.77□□□□□ -0.37
SCARB2-221ENST00000640341 PHF7Q9BWX1 381 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms