RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 ARL2P36404 184 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 PSMC5P62195 406 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 RPS11P62280 158 aaKnown RBP eCLIP1.85□□□□□ -2.11
CCDC7-216ENST00000640058 LINC00303Q3SY05 128 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 C16orf47Q6ZP98 133 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-216ENST00000640058 OR51L1Q8NGJ5 315 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 OR52N1Q8NH53 320 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 SFXN5Q8TD22 340 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 ZNF649Q9BS31 505 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 ADA2Q9NZK5 511 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 NDRG2Q9UN36 371 aaKnown RBP1.85□□□□□ -2.11
CCDC7-216ENST00000640058 KPTNQ9Y664 436 aa1.85□□□□□ -2.11
CCDC7-216ENST00000640058 LOC100653049A0A140TA62 436 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 GOLGA8JA6NMD2 632 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 CENPBD1B2RD01 187 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 H0YC42 278 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 OR7C2O60412 319 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 TRAPPC6AO75865 159 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 KRT34O76011 436 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 SMC2O95347 1197 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 PLEKHA8P1O95397 391 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 GOLGA8HP0CJ92 632 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 PRKACBP22694 351 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 IL3RAP26951 378 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 GNRHRP30968 328 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 PRSS3P35030 304 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 MLF1P58340 268 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 SLC35A1P78382 337 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 SLC35B1P78383 322 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 FUT5Q11128 374 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 DMC1Q14565 340 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 SP6Q3SY56 376 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 LUZP6Q538Z0 58 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 CPTPQ5TA50 214 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 Q6ZSR6 202 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 ZCCHC24Q8N2G6 241 aaKnown RBP1.84□□□□□ -2.11
CCDC7-216ENST00000640058 OR2Z1Q8NG97 314 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 OR4A15Q8NGL6 344 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 MITD1Q8WV92 249 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 WDR34Q96EX3 536 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 ALS2CR12Q96Q35 445 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 NAPGQ99747 312 aaPredicted RBP1.84□□□□□ -2.11
CCDC7-216ENST00000640058 GABRG3Q99928 467 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 CHID1Q9BWS9 393 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 FRMD8P1Q9BZ68 369 aaPredicted RBP1.84□□□□□ -2.11
CCDC7-216ENST00000640058 CHRNA10Q9GZZ6 450 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 STMN4Q9H169 189 aaPredicted RBP1.84□□□□□ -2.11
CCDC7-216ENST00000640058 LINC00574Q9H8X3 128 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 CSNK1G1Q9HCP0 422 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 TFR2Q9UP52 801 aa1.84□□□□□ -2.11
CCDC7-216ENST00000640058 NUP205Q92621 2012 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 TRAV8-4A0A0B4J246 113 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 GSTTP1A0A1W2PQM5 241 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.83□□□□□ -2.12
CCDC7-216ENST00000640058 P01737 135 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 RPN2P04844 631 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 SLC35G6P0C7Q6 338 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 TAS2R43P59537 309 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 C2orf54Q08AI8 447 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 ST3GAL4Q11206 333 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 MAD2L1BPQ15013 274 aaPredicted RBP1.83□□□□□ -2.12
CCDC7-216ENST00000640058 HNRNPA1L2Q32P51 320 aaKnown RBP1.83□□□□□ -2.12
CCDC7-216ENST00000640058 PRSS54Q6PEW0 395 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 MORN3Q6PF18 240 aaPredicted RBP1.83□□□□□ -2.12
CCDC7-216ENST00000640058 NT5DC3Q86UY8 548 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 SLC7A5P1Q8MH63 180 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 STK40Q8N2I9 435 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 ZNF664Q8N3J9 261 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 RNF10Q8N5U6 811 aaKnown RBP1.83□□□□□ -2.12
CCDC7-216ENST00000640058 OR2M7Q8NG81 312 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 OR4M2Q8NGB6 313 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 OR6K6Q8NGW6 343 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 OR1S1Q8NH92 325 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 ZFAND1Q8TCF1 268 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 MRPL48Q96GC5 212 aaKnown RBP1.83□□□□□ -2.12
CCDC7-216ENST00000640058 SNF8Q96H20 258 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 GAL3ST2Q9H3Q3 398 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 CA10Q9NS85 328 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 TAS2R5Q9NYW4 299 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 PPIL1Q9Y3C6 166 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 MROH5Q6ZUA9 1318 aa1.83□□□□□ -2.12
CCDC7-216ENST00000640058 TRAV8-6A0A0B4J262 113 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 IGKV1-6A0A0C4DH72 117 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 TMEM72A0PK05 275 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 J3QT63 122 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 UPK1AO00322 258 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 MYL12BO14950 172 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 ALOX12BO75342 701 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 IGKV1-39P01597 117 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 MBP02144 154 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 IGKV1D-39P04432 117 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 MMP7P09237 267 aaPredicted RBP1.82□□□□□ -2.12
CCDC7-216ENST00000640058 OR5AL1P0C617 328 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 STAG3L2P0CL84 134 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 HOXB8P17481 243 aaPredicted RBP1.82□□□□□ -2.12
CCDC7-216ENST00000640058 PAX6P26367 422 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 MPV17P39210 176 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 TAS2R60P59551 318 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 PPP1CAP62136 330 aa1.82□□□□□ -2.12
CCDC7-216ENST00000640058 FAM53BQ14153 422 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms