RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 GPX5O75715 221 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 RGS9O75916 674 aaPredicted RBP13.49□□□□□ -0.25
CLN6-216ENST00000636876 IGFBP3P17936 291 aaPredicted RBP13.49□□□□□ -0.25
CLN6-216ENST00000636876 RAB3AP20336 220 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 AZGP1P25311 298 aaKnown RBP13.49□□□□□ -0.25
CLN6-216ENST00000636876 GIFP27352 417 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 TMEM33P57088 247 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 FABP5Q01469 135 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 RIN1Q13671 783 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 ZNF181Q2M3W8 571 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 TMEM91Q6ZNR0 172 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 CEACAM19Q7Z692 300 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 ZNF573Q86YE8 665 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 C11orf53Q8IXP5 236 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 OR11L1Q8NGX0 322 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 C10orf105Q8TEF2 133 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 RPL3LQ92901 407 aaKnown RBP13.49□□□□□ -0.25
CLN6-216ENST00000636876 HPS1Q92902 700 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 ORAI1Q96D31 301 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 BORCS8Q96FH0 119 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 MRPS26Q9BYN8 205 aaKnown RBP13.49□□□□□ -0.25
CLN6-216ENST00000636876 NEK6Q9HC98 313 aa13.49□□□□□ -0.25
CLN6-216ENST00000636876 IGKV1-27A0A075B6S5 117 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 TRAV8-7A0A075B6U6 113 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 A0A1W2PPK0 400 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 LRRC30A6NM36 301 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 CLDN25C9JDP6 229 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 NDUFS8O00217 210 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 UCHL1P09936 223 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 OCMP0CE72 109 aaPredicted RBP13.48□□□□□ -0.25
CLN6-216ENST00000636876 TGFBR2P37173 567 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 RBMXP38159 391 aaKnown RBP13.48□□□□□ -0.25
CLN6-216ENST00000636876 RBP2P50120 134 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 PPP3R1P63098 170 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 FAM27D1Q5T7N8 215 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 CD200R1LQ6Q8B3 271 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 ZNF826PQ6ZT77 177 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 LHFPL2Q6ZUX7 228 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 SCCPDHQ8NBX0 429 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 OR51A2Q8NGJ7 313 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 RNF7Q9UBF6 113 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 CKLFQ9UBR5 152 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 VPS13CQ709C8 3753 aa13.48□□□□□ -0.25
CLN6-216ENST00000636876 IGHV4-30-2A0A087WSY4 118 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 hCG_1807616A0A1W2PRN6 198 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 TMEM178BH3BS89 294 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 J3QT63 122 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 GABRPO00591 440 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 CDIPTO14735 213 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 PPIHO43447 177 aaKnown RBP13.47□□□□□ -0.25
CLN6-216ENST00000636876 CYB5R3P00387 301 aaPredicted RBP13.47□□□□□ -0.25
CLN6-216ENST00000636876 HCKP08631 526 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 IRF2P14316 349 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 CFHR2P36980 270 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 GPR6P46095 362 aaPredicted RBP13.47□□□□□ -0.25
CLN6-216ENST00000636876 HAAOP46952 286 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 ATP1B3P54709 279 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 RIPPLY3P57055 190 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 HAGHLQ6PII5 290 aaPredicted RBP13.47□□□□□ -0.25
CLN6-216ENST00000636876 WDR82Q6UXN9 313 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 C1orf87Q8N0U7 546 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 WFDC11Q8NEX6 87 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 AQP3Q92482 292 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 PHYHIPQ92561 330 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 Q96MF0 132 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 SPACA5Q96QH8 159 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 PIMREGQ9BSJ6 248 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 PPIL3Q9H2H8 161 aaKnown RBP13.47□□□□□ -0.25
CLN6-216ENST00000636876 TMEM138Q9NPI0 162 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 FOXJ3Q9UPW0 622 aa13.47□□□□□ -0.25
CLN6-216ENST00000636876 FLNAP21333 2647 aaKnown RBP13.47□□□□□ -0.25
CLN6-216ENST00000636876 ZFHX3Q15911 3703 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 TRDV1A0A1B0GX56 115 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 TRIM64BA6NI03 449 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 VWC2LB2RUY7 222 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 ALDOBP05062 364 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 GALP22466 123 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 MPZP25189 248 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 BDKRB2P30411 391 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 MTCP1P56278 107 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 HSD17B12Q53GQ0 312 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 ANGPTL5Q86XS5 388 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 CALHM1Q8IU99 346 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 OR10Z1Q8NGY1 313 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 LRRC29Q8WV35 223 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 RAB1CQ92928 201 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 TIMD4Q96H15 378 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 PKIBQ9C010 78 aa13.46□□□□□ -0.25
CLN6-216ENST00000636876 MAGEB3O15480 346 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 ARL6IP5O75915 188 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 SLC25A16P16260 332 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 CD36P16671 472 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 NR4A2P43354 598 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 KISS1Q15726 138 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 CRIP3Q6Q6R5 217 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 RNF144BQ7Z419 303 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 PEG10Q86TG7 708 aaKnown RBP13.45□□□□□ -0.26
CLN6-216ENST00000636876 GCSAMQ8N6F7 178 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 OR52N4Q8NGI2 321 aa13.45□□□□□ -0.26
CLN6-216ENST00000636876 ZNF671Q8TAW3 534 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms