RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 DCAF12L2Q5VW00 463 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 TMEM42Q69YG0 159 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 SFRP4Q6FHJ7 346 aaPredicted RBP6.9□□□□□ -1.3
PNKP-226ENST00000636840 FAHD2BQ6P2I3 314 aaPredicted RBP6.9□□□□□ -1.3
PNKP-226ENST00000636840 HAGHLQ6PII5 290 aaPredicted RBP6.9□□□□□ -1.3
PNKP-226ENST00000636840 WDR82Q6UXN9 313 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 ZNF826PQ6ZT77 177 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 AHSA2Q719I0 299 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 UTS2BQ765I0 119 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 SLC36A1Q7Z2H8 476 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 MKXQ8IYA7 352 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 GCSAMQ8N6F7 178 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 DNAAF1Q8NEP3 725 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 GPR148Q8TDV2 347 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 TSEN15Q8WW01 171 aaKnown RBP6.9□□□□□ -1.3
PNKP-226ENST00000636840 GATAD2BQ8WXI9 593 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 THRSPQ92748 146 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 RPL3LQ92901 407 aaKnown RBP6.9□□□□□ -1.3
PNKP-226ENST00000636840 TMEM186Q96B77 213 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 TMIGD2Q96BF3 282 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 CPNE2Q96FN4 548 aaPredicted RBP6.9□□□□□ -1.3
PNKP-226ENST00000636840 FAHD2AQ96GK7 314 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 MED30Q96HR3 178 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 TLNRD1Q9H1K6 362 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 OR51I2Q9H344 312 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 LPAR2Q9HBW0 351 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 HIF1ANQ9NWT6 349 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 DCAF16Q9NXF7 216 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 CLN8Q9UBY8 286 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 OR5V1Q9UGF6 321 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 ZNF281Q9Y2X9 895 aa6.9□□□□□ -1.3
PNKP-226ENST00000636840 VPS13CQ709C8 3753 aa6.9□□□□□ -1.31
PNKP-226ENST00000636840 NIPBLQ6KC79 2804 aaeCLIP6.9□□□□□ -1.31
PNKP-226ENST00000636840 ZANQ9Y493 2812 aa6.9□□□□□ -1.31
PNKP-226ENST00000636840 CR1P17927 2039 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 WNK2Q9Y3S1 2297 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 SETD2Q9BYW2 2564 aaPredicted RBP6.89□□□□□ -1.31
PNKP-226ENST00000636840 PPIAL4CA0A0B4J2A2 164 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 A0A0G2JMP0 313 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 A0A0X1KG70 313 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 CEACAM18A8MTB9 384 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 SRRM5B3KS81 715 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 FAM157AC9JC47 383 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 INAFM1C9JVW0 142 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 J3QLI3 93 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 J3QT63 122 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 SLC1A7O00341 560 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 OGG1O15527 345 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 AKR7A2O43488 359 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 ADAM20O43506 726 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 RGS10O43665 173 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 ZFPL1O95159 310 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 LHBP01229 141 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 IFNA2P01563 188 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 CDK1P06493 297 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 ATF1P18846 271 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 IL2RGP31785 369 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 CD80P33681 288 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 SRP14P37108 136 aaKnown RBP6.89□□□□□ -1.31
PNKP-226ENST00000636840 PITPNBP48739 271 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 MTCP1P56278 107 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 WNT4P56705 351 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 LCN2P80188 198 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 C11orf91Q3C1V1 193 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 FAM201AQ5SY85 155 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 OR2G6Q5TZ20 316 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 RNLSQ5VYX0 342 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 TEX36Q5VZQ5 186 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 BTNL3Q6UXE8 466 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 LHFPL2Q6ZUX7 228 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 C11orf53Q8IXP5 236 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 NANOGP1Q8N7R0 232 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 OR4M2Q8NGB6 313 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 HPSE2Q8WWQ2 592 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 AQP3Q92482 292 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 SPSB1Q96BD6 273 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 C12orf43Q96C57 262 aaKnown RBP6.89□□□□□ -1.31
PNKP-226ENST00000636840 CNBD2Q96M20 576 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 ZNF184Q99676 751 aaPredicted RBP6.89□□□□□ -1.31
PNKP-226ENST00000636840 PDCD1LG2Q9BQ51 273 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 ZNF649Q9BS31 505 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 MND1Q9BWT6 205 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 SSBP3Q9BWW4 388 aaPredicted RBP6.89□□□□□ -1.31
PNKP-226ENST00000636840 YTHDF1Q9BYJ9 559 aaKnown RBP6.89□□□□□ -1.31
PNKP-226ENST00000636840 CHST5Q9GZS9 411 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 CCDC90BQ9GZT6 254 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 DNTTIP1Q9H147 329 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 ZCCHC4Q9H5U6 513 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 PPP1R3EQ9H7J1 279 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 CLEC2DQ9UHP7 191 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 GLS2Q9UI32 602 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 DOCK11Q5JSL3 2073 aa6.89□□□□□ -1.31
PNKP-226ENST00000636840 MALRD1Q5VYJ5 2156 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 LOC105371242A0A075B767 164 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 PQLC2LA1A4F0 135 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 NKX6-3A6NJ46 265 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 E9PI62 339 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 TRAPPC2LH3BP13 241 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 GPR37O15354 613 aa6.88□□□□□ -1.31
PNKP-226ENST00000636840 TMPRSS2O15393 492 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms