RNA–Protein interactions for RNA: ENST00000636603.1

CHRNA7-217, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-217ENST00000636603 ZNF704Q6ZNC4 412 aaPredicted RBP13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 IDO2Q6ZQW0 420 aa13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 SLC16A14Q7RTX9 510 aa13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 RNF144BQ7Z419 303 aa13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 RTN4RL2Q86UN3 420 aa13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 JAGN1Q8N5M9 183 aa13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 PTX4Q96A99 478 aa13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 FGGYQ96C11 551 aa13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 ADAT3Q96EY9 351 aaPredicted RBP13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 CCDC120Q96HB5 630 aa13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 CNTD2Q9H8S5 307 aa13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 MYOZ1Q9NP98 299 aaPredicted RBP13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 ZNF835Q9Y2P0 537 aa13.36□□□□□ -0.27
CHRNA7-217ENST00000636603 TMEM82A0PJX8 343 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 TMEM235A6NFC5 223 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 IL2RAP01589 272 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 HLA-HP01893 362 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 DBHP09172 617 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 CST2P09228 141 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 M6PRP20645 277 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 IGHV1-2P23083 117 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 ZNF260Q3ZCT1 412 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 HIKESHIQ53FT3 197 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 TMEM244Q5VVB8 128 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 ZNF774Q6NX45 483 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 NAA40Q86UY6 237 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 CDH26Q8IXH8 852 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 ZNF610Q8N9Z0 462 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 GJC3Q8NFK1 279 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 OR4S1Q8NGB4 309 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 OR52N4Q8NGI2 321 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 LRRC20Q8TCA0 184 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 RBPMSQ93062 196 aaKnown RBP13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 CMBLQ96DG6 245 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 CXorf58Q96LI9 332 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 PLEK2Q9NYT0 353 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 A0A0A6YYH2 397 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 A6NJ64 397 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 ZNF878C9JN71 531 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 LYZL6O75951 148 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 AMY2AP04746 511 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 RAB14P61106 215 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 TAF13Q15543 124 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 RSPO1Q2MKA7 263 aaPredicted RBP13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 C4orf46Q504U0 113 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 ZNF529Q6P280 563 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 ACBD4Q8NC06 268 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 OR6K3Q8NGY3 331 aa13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 ZNF230Q9UIE0 474 aaPredicted RBP13.35□□□□□ -0.27
CHRNA7-217ENST00000636603 FXYD6-FXYD2A0A087WZ82 144 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 A0A1B0GTI1 187 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 LOC105371267A0A1B0GV96 52 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 A0A1W2PR80 420 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 C5orf63A6NC05 138 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 MFSD2BA6NFX1 497 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 CGAP01215 116 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 UBCP0CG48 685 aaKnown RBP13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 PPP3CBP16298 524 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 RAB6AP20340 208 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 C4BPBP20851 252 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 MPGP29372 298 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 PTGER4P35408 488 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 HIST1H3AP68431 136 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 SORDQ00796 357 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 PSG4Q00888 419 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 SLC22A6Q4U2R8 563 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 HIST2H3PS2Q5TEC6 136 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 ALKAL2Q6UX46 152 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 C17orf107Q6ZR85 190 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 HIST2H3AQ71DI3 136 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 OR1J2Q8NGS2 313 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 TNFAIP8L1Q8WVP5 186 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 SLC25A21Q9BQT8 299 aaPredicted RBP13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 FXYD6Q9H0Q3 95 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 TMEM138Q9NPI0 162 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 PLSCR4Q9NRQ2 329 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 KCNN3Q9UGI6 736 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 hCG_1807616A0A1W2PRN6 198 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 F5H5K5 113 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 RAD51DO75771 328 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 EDN3P14138 238 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 HSD11B1P28845 292 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 TIMP3P35625 211 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 C12orf45Q8N5I9 185 aaPredicted RBP13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 NKAIN3Q8N8D7 197 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 OR1K1Q8NGR3 316 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 CYYR1Q96J86 154 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 SOX7Q9BT81 388 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 WNT5BQ9H1J7 359 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 MED9Q9NWA0 146 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 ZNF107Q9UII5 783 aaPredicted RBP13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 NUP50Q9UKX7 468 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 PROCRQ9UNN8 238 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 VSIG4Q9Y279 399 aa13.34□□□□□ -0.27
CHRNA7-217ENST00000636603 EPG5Q9HCE0 2579 aa13.33□□□□□ -0.27
CHRNA7-217ENST00000636603 ZNF736B4DX44 427 aaPredicted RBP13.33□□□□□ -0.28
CHRNA7-217ENST00000636603 SGCEO43556 437 aa13.33□□□□□ -0.28
CHRNA7-217ENST00000636603 SNAPC5O75971 98 aa13.33□□□□□ -0.28
CHRNA7-217ENST00000636603 FARS2O95363 451 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms