RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 LPCAT4Q643R3 524 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 LHFPL3Q86UP9 236 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 PRSS35Q8N3Z0 413 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 PNLDC1Q8NA58 520 aaKnown RBP13.05□□□□□ -0.32
LINC00339-207ENST00000634712 SPATA3Q8NHX4 192 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 CYGBQ8WWM9 190 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 ST8SIA4Q92187 359 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 TMIGD2Q96BF3 282 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 SEH1LQ96EE3 360 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 JMJD8Q96S16 334 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 WDR13Q9H1Z4 485 aa13.05□□□□□ -0.32
LINC00339-207ENST00000634712 RHBDL1O75783 438 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 PPIAL4GP0DN37 164 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 HAAOP46952 286 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 ISL1P61371 349 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 RAB40BQ12829 278 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 GALEQ14376 348 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 C11orf91Q3C1V1 193 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 KRTAP24-1Q3LI83 254 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 LRRC10Q5BKY1 277 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 TMEM42Q69YG0 159 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 RBMS3Q6XE24 437 aaKnown RBP13.04□□□□□ -0.32
LINC00339-207ENST00000634712 Q6ZSR3 168 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 BTN2A1Q7KYR7 527 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 PACRGLQ8N7B6 248 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 OR2G2Q8NGZ5 317 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 C22orf15Q8WYQ4 148 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 AQP3Q92482 292 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 MED30Q96HR3 178 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 C4orf36Q96KX1 117 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 ALG8Q9BVK2 526 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 MS4A7Q9GZW8 240 aaPredicted RBP13.04□□□□□ -0.32
LINC00339-207ENST00000634712 DNTTIP1Q9H147 329 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 INPP5EQ9NRR6 644 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 NLKQ9UBE8 527 aa13.04□□□□□ -0.32
LINC00339-207ENST00000634712 FAM230AA0A1W2PPH8 454 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 ANKRD61A6NGH8 418 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 C22orf46C9J442 243 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.03□□□□□ -0.32
LINC00339-207ENST00000634712 GATBO75879 557 aaKnown RBP13.03□□□□□ -0.32
LINC00339-207ENST00000634712 FSHBP01225 129 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 GABRA2P47869 451 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 FGF12P61328 243 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 IKZF1Q13422 519 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 ATPAF1Q5TC12 328 aaPredicted RBP13.03□□□□□ -0.32
LINC00339-207ENST00000634712 USP43Q70EL4 1123 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 PHC2Q8IXK0 858 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 RDH10Q8IZV5 341 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 DHRSXQ8N5I4 330 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 SLC6A7Q99884 636 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 SMURF1Q9HCE7 757 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 RASL12Q9NYN1 266 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 POLDIP2Q9Y2S7 368 aa13.03□□□□□ -0.32
LINC00339-207ENST00000634712 LOC107986453A0A1B0GWG9 222 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 OR2AT4A6NND4 320 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 J3QT63 122 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 GPR37O15354 613 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 PEX2P28328 305 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 KIR3DL2P43630 455 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 ELF3P78545 371 aaPredicted RBP13.02□□□□□ -0.33
LINC00339-207ENST00000634712 METTL11BQ5VVY1 283 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 STUMQ69YW2 141 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 EGFL6Q8IUX8 553 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 FAM216BQ8N7L0 139 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 SETD9Q8NE22 299 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 TRMT10AQ8TBZ6 339 aaKnown RBP13.02□□□□□ -0.33
LINC00339-207ENST00000634712 DACT3Q96B18 629 aaPredicted RBP13.02□□□□□ -0.33
LINC00339-207ENST00000634712 UPRTQ96BW1 309 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 C10orf35Q96D05 121 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 PCGF1Q9BSM1 259 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 C19orf24Q9BVV8 132 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 FRRS1LQ9P0K9 344 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 MYRFQ9Y2G1 1151 aa13.02□□□□□ -0.33
LINC00339-207ENST00000634712 IGHV3OR16-10A0A075B7F0 116 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 PQLC2LA1A4F0 135 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 ZNF879B4DU55 563 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 TRIM77I1YAP6 450 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 TOX4O94842 621 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 VENTXO95231 258 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 OCM2P0CE71 109 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 OCMP0CE72 109 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-207ENST00000634712 ZNF20P17024 532 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 TGM4P49221 684 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 CCR9P51686 369 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 FUT6P51993 359 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 IL13RA1P78552 427 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 MRPL28Q13084 256 aaKnown RBP13.01□□□□□ -0.33
LINC00339-207ENST00000634712 ALKBH1Q13686 389 aaKnown RBP13.01□□□□□ -0.33
LINC00339-207ENST00000634712 KLF17Q5JT82 389 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-207ENST00000634712 ZNF691Q5VV52 312 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 FDX2Q6P4F2 183 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 SYS1Q8N2H4 156 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 ZNF676Q8N7Q3 588 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 OR52I1Q8NGK6 324 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 ANGPTL6Q8NI99 470 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 NPRL2Q8WTW4 380 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 APH1BQ8WW43 257 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 PP6455Q8WZ26 134 aa13.01□□□□□ -0.33
LINC00339-207ENST00000634712 H1FXQ92522 213 aaKnown RBP13.01□□□□□ -0.33
LINC00339-207ENST00000634712 PELI1Q96FA3 418 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms