RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 SPATA46Q5T0L3 261 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 Q6ZSR3 168 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 RFPL4BQ6ZWI9 263 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 DOK3Q7L591 496 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 COMMD2Q86X83 199 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 PLPP7Q8NBV4 271 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 OR14K1Q8NGZ2 314 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 OR2AE1Q8NHA4 323 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 CLDND2Q8NHS1 167 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 TMEM158Q8WZ71 300 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 ADAT3Q96EY9 351 aaPredicted RBP10.71□□□□□ -0.69
PNKP-217ENST00000625216 GFI1Q99684 422 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 POFUT1Q9H488 388 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 SAP30LQ9HAJ7 183 aa10.71□□□□□ -0.69
PNKP-217ENST00000625216 YLPM1P49750 1951 aaKnown RBP10.7□□□□□ -0.7
PNKP-217ENST00000625216 ANKRD61A6NGH8 418 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 CLDN25C9JDP6 229 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 SPRY3O43610 288 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 CDC14BO60729 498 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 IGHV1-46P01743 117 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 CD55P08174 381 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 ADRA2CP18825 462 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 PRSS12P56730 875 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 OR10A3P58181 314 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 PSG7Q13046 419 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 DGUOKQ16854 277 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 LRRTM1Q86UE6 522 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 GLCCI1Q86VQ1 547 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 OR52H1Q8NGJ2 320 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 OR5L1Q8NGL2 311 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 THRSPQ92748 146 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 RAB1CQ92928 201 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 SLC25A46Q96AG3 418 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 SGK3Q96BR1 496 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 HAVCR1Q96D42 359 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 TIMD4Q96H15 378 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 SLC30A2Q9BRI3 323 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 TAS2R4Q9NYW5 299 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 V9GYS6 101 aa10.7□□□□□ -0.7
PNKP-217ENST00000625216 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.69□□□□□ -0.78e-10■■■■■ 38.7
PNKP-217ENST00000625216 hCG_38984A0A1B0GV85 526 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 XRCC2O43543 280 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 TIMM8AO60220 97 aaPredicted RBP10.69□□□□□ -0.7
PNKP-217ENST00000625216 DHRS3O75911 302 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 IGFBP3P17936 291 aaPredicted RBP10.69□□□□□ -0.7
PNKP-217ENST00000625216 KITLGP21583 273 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 LMO4P61968 165 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 ZNF92Q03936 586 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 CEP78Q5JTW2 689 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 TPRA1Q86W33 373 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 PARP16Q8N5Y8 322 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 OR51A2Q8NGJ7 313 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 SPSB4Q96A44 273 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 APOBEC3DQ96AK3 386 aaPredicted RBP10.69□□□□□ -0.7
PNKP-217ENST00000625216 FGGYQ96C11 551 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 REEP6Q96HR9 211 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 NXF2Q9GZY0 626 aaKnown RBP10.69□□□□□ -0.7
PNKP-217ENST00000625216 SP140LQ9H930 580 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 TREM2Q9NZC2 230 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 PURGQ9UJV8 347 aaKnown RBP10.69□□□□□ -0.7
PNKP-217ENST00000625216 STARD10Q9Y365 291 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 SVEP1Q4LDE5 3571 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 MXRA5Q9NR99 2828 aa10.69□□□□□ -0.7
PNKP-217ENST00000625216 MALRD1Q5VYJ5 2156 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 TRAV20A0A0B4J274 112 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 A6NIN4 97 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 ZSCAN5BA6NJL1 495 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 RNF212BA8MTL3 300 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 CD2P06729 351 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 MSMBP08118 114 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 RAC2P15153 192 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 SRMP19623 302 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 RAB3BP20337 219 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 TNFSF4P23510 183 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 ACKR3P25106 362 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 LSAMPQ13449 338 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 TMEM255AQ5JRV8 349 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 OR51F2Q8NH61 342 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 MCFD2Q8NI22 146 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 TBC1D15Q8TC07 691 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 CCL17Q92583 94 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 GTF3AQ92664 365 aaKnown RBP10.68□□□□□ -0.7
PNKP-217ENST00000625216 TMEM186Q96B77 213 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 RAB39BQ96DA2 213 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 CMBLQ96DG6 245 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 RGCCQ9H4X1 137 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 SMURF1Q9HCE7 757 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 TCF7L1Q9HCS4 588 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 PTTG3PQ9NZH4 202 aa10.68□□□□□ -0.7
PNKP-217ENST00000625216 AK6Q9Y3D8 172 aaKnown RBP10.68□□□□□ -0.7
PNKP-217ENST00000625216 WNT9BO14905 357 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 PHF1O43189 567 aaPredicted RBP10.67□□□□□ -0.7
PNKP-217ENST00000625216 CLPXO76031 633 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 MAS1P04201 325 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 SLC2A2P11168 524 aaPredicted RBP10.67□□□□□ -0.7
PNKP-217ENST00000625216 FAHP16930 419 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 ZNF12P17014 697 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 ZNF20P17024 532 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 TNFRSF1AP19438 455 aa10.67□□□□□ -0.7
PNKP-217ENST00000625216 SOX6P35712 828 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms