RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 CCL3P10147 92 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 NKX2-1P43699 371 aaPredicted RBP11.36□□□□□ -0.59
MSH6-215ENST00000622629 HAAOP46952 286 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 ZP1P60852 638 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 MICBQ29980 383 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 DPPA2Q7Z7J5 298 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 C2CD4CQ8TF44 421 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 RTN4RQ9BZR6 473 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 VSIG4Q9Y279 399 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 MS4A18H0YCH9 400 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 EFSO43281 561 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 FPR2P25090 351 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 RRADP55042 308 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 MS4A18Q3C1V0 323 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 OSR2Q8N2R0 312 aa11.36□□□□□ -0.59
MSH6-215ENST00000622629 HEATR5AQ86XA9 2040 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 SIGLEC5O15389 551 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 SFT2D2O95562 160 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 CD46P15529 392 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 SIGLEC14Q08ET2 396 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 CLPPQ16740 277 aaPredicted RBP11.35□□□□□ -0.59
MSH6-215ENST00000622629 TFAP2EQ6VUC0 442 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 LOXL2Q9Y4K0 774 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.35□□□□□ -0.59
MSH6-215ENST00000622629 IGHV5-10-1A0A0J9YXX1 117 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 RPS10-NUDT3A0A1W2PQS6 291 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 NMBP08949 121 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 AKR1C3P42330 323 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 RPS10P46783 165 aaKnown RBP11.35□□□□□ -0.59
MSH6-215ENST00000622629 CLEC18BQ6UXF7 455 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 C14orf79Q96F83 325 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 ZNF385AQ96PM9 386 aaKnown RBP11.35□□□□□ -0.59
MSH6-215ENST00000622629 PLSCR5A0PG75 271 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 RAB19A4D1S5 217 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 SHEQ5VZ18 495 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 TMEM182Q6ZP80 229 aaPredicted RBP11.35□□□□□ -0.59
MSH6-215ENST00000622629 SLC25A42Q86VD7 318 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 OR2V1Q8NHB1 315 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 ROS1P08922 2347 aa11.35□□□□□ -0.59
MSH6-215ENST00000622629 GBF1Q92538 1859 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 TO15178 435 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 TXNL1O43396 289 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 CRHP06850 196 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 CBR1P16152 277 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 ASCL1P50553 236 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 FOXK1P85037 733 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 IL11RAQ14626 422 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 PLPPR5Q32ZL2 321 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 ADAM5Q6NVV9 412 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 DRAM2Q6UX65 266 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 LHFPL2Q6ZUX7 228 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 BPHLQ86WA6 291 aaPredicted RBP11.34□□□□□ -0.59
MSH6-215ENST00000622629 OR5AP2Q8NGF4 316 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 FAM96BQ9Y3D0 163 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 A0A1W2PR77 199 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 PATE3B3GLJ2 98 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 E9PQ18 207 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 NXPH2O95156 264 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 CLN3Q13286 438 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 OR2M3Q8NG83 312 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 OR2G3Q8NGZ4 309 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 ZNF519Q8TB69 540 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 INTS12Q96CB8 462 aaKnown RBP11.34□□□□□ -0.59
MSH6-215ENST00000622629 KLHDC3Q9BQ90 382 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 DEFB127Q9H1M4 99 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 GP1BAP07359 652 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 GRPP07492 148 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 MRPS34P82930 218 aaKnown RBP11.34□□□□□ -0.59
MSH6-215ENST00000622629 SGK3Q96BR1 496 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 KCNK17Q96T54 332 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 MED19A0JLT2 244 aaPredicted RBP11.34□□□□□ -0.59
MSH6-215ENST00000622629 OR6C6A6NF89 314 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 RAB27BO00194 218 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 TAAR5O14804 337 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 CCL2P13500 99 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 CHATP28329 748 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 RAC1P63000 192 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 SRPXP78539 464 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 ZNF674Q2M3X9 581 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 TSPO2Q5TGU0 170 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 BVESQ8NE79 360 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 RPS4Y2Q8TD47 263 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 SPSB1Q96BD6 273 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 GPR160Q9UJ42 338 aa11.34□□□□□ -0.59
MSH6-215ENST00000622629 GPR137BO60478 399 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 PDGFBP01127 241 aaPredicted RBP11.33□□□□□ -0.6
MSH6-215ENST00000622629 ZNF266Q14584 549 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 AVPI1Q5T686 147 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 CLEC9AQ6UXN8 241 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 UBALD1Q8TB05 177 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 SFT2D1Q8WV19 159 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 KIRREL1Q96J84 757 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 RHOFQ9HBH0 211 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 SPACA1Q9HBV2 294 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 RAB18Q9NP72 206 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 P4HTMQ9NXG6 502 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 PLA2G3Q9NZ20 509 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 SELENOVP59797 346 aa11.33□□□□□ -0.6
MSH6-215ENST00000622629 OR10D3Q8NH80 312 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms