RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 ADAMTS17Q8TE56 1095 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 KCNE4Q8WWG9 221 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 ROBO4Q8WZ75 1007 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 MR1Q95460 341 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 PIGTQ969N2 578 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 FBXO17Q96EF6 278 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 CPNE2Q96FN4 548 aaPredicted RBP8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 CNTNAP3BQ96NU0 1288 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 UCN2Q96RP3 112 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 RBM24Q9BX46 236 aaKnown RBP8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 CNTNAP3Q9BZ76 1288 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 METTL9Q9H1A3 318 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 METTL8Q9H825 291 aaKnown RBP8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 ZC4H2Q9NQZ6 224 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 MMP26Q9NRE1 261 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 C1orf123Q9NWV4 160 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 TUBD1Q9UJT1 453 aa8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 PURGQ9UJV8 347 aaKnown RBP8.4□□□□□ -1.06
IGHV3-54-201ENST00000622166 IGKV1D-8A0A087WSZ0 117 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 IGHV3-15A0A0B4J1V0 119 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 PMS2P1A4D2B8 440 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 CRYM-AS1A6NIL9 109 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 FAM74A7A6NL05 159 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 ATP6V1G2-DDX39BF2Z307 99 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 HTR3BO95264 441 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 SERPINA5P05154 406 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF708P17019 499 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 PI3P19957 117 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 SRD5A2P31213 254 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 RBMXP38159 391 aaKnown RBP8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 DUSP3P51452 185 aaPredicted RBP8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 RAC3P60763 192 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZFP36L1Q07352 338 aaKnown RBP8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 CHAF1BQ13112 559 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 RAB32Q13637 225 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 CNN3Q15417 329 aaKnown RBP8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 FAM74A3Q4VXF1 159 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 TMEM42Q69YG0 159 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF585AQ6P3V2 769 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 AGBL5Q8NDL9 886 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 SEMA6DQ8NFY4 1073 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 OR5D18Q8NGL1 313 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 OR2Y1Q8NGV0 311 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 OR1F12Q8NHA8 337 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 CPT1CQ8TCG5 803 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 NPRL2Q8WTW4 380 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 HLA-CQ95604 372 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF775Q96BV0 537 aaPredicted RBP8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 POM121Q96HA1 1249 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 SMIM8Q96KF7 97 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 GNRHR2Q96P88 292 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 SRXN1Q9BYN0 137 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 GPR173Q9NS66 373 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 PLEK2Q9NYT0 353 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF629Q9UEG4 869 aaPredicted RBP8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF391Q9UJN7 358 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 MCTS1Q9ULC4 181 aaKnown RBP8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 SIT1Q9Y3P8 196 aa8.39□□□□□ -1.07
IGHV3-54-201ENST00000622166 OR6C6A6NF89 314 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF716A6NP11 495 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 MSTNO14793 375 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 KCNAB3O43448 404 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 SGCEO43556 437 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 ACTL6AO96019 429 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 GAPDHP04406 335 aaKnown RBP8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 DBHP09172 617 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 TMEM225BP0DP42 221 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 HKR1P10072 659 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 CHATP28329 748 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 PMELP40967 661 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 MTCP1P56278 107 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 SCRN3Q0VDG4 424 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 SNAI3Q3KNW1 292 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 ZNF528Q3MIS6 628 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 PEAR1Q5VY43 1037 aaPredicted RBP8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 TMEM268Q5VZI3 342 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 DHRS7BQ6IAN0 325 aaPredicted RBP8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 EIF5AL1Q6IS14 154 aaKnown RBP8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 RPUSD3Q6P087 351 aaKnown RBP8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 DHRS11Q6UWP2 260 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 LHFPL2Q6ZUX7 228 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 C6orf201Q7Z4U5 140 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 SGPP2Q8IWX5 399 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 SVBPQ8N300 66 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 LRRC18Q8N456 261 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 TMEM156Q8N614 296 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 BHLHE23Q8NDY6 225 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 OR4A4PQ8NGN8 299 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 TMED6Q8WW62 240 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 MAFIPQ8WZ33 124 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 SGCZQ96LD1 299 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 TSNAXQ99598 290 aaKnown RBP8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 TMEM38BQ9NVV0 291 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 PLEKHJ1Q9NW61 149 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 HPF1Q9NWY4 346 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 PRR13Q9NZ81 148 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 IL36GQ9NZH8 169 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 LPAR3Q9UBY5 353 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 NDRG3Q9UGV2 375 aa8.38□□□□□ -1.07
IGHV3-54-201ENST00000622166 ANXA10Q9UJ72 324 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms