RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 RGCCQ9H4X1 137 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 NIT2Q9NQR4 276 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 GHRLQ9UBU3 117 aa17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 MCTS1Q9ULC4 181 aaKnown RBP17.18■□□□□ 0.34
PDLIM3-212ENST00000620787 DHRS7CA6NNS2 312 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 STMND1H3BQB6 276 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 MASP2O00187 686 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 DANCRP0C864 163 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 FOLR1P15328 257 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 ECI1P42126 302 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 FAM209BQ5JX69 171 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 CLEC9AQ6UXN8 241 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 TMEM106CQ9BVX2 250 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 PLEKHA2Q9HB19 425 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 SPACA1Q9HBV2 294 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 RRP8O43159 456 aaKnown RBP17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 IGHV2-5P01817 119 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 OPN1LWP04000 364 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 DAOP14920 347 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 GLP1RP43220 463 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 ARL4DP49703 201 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 POLR2GP62487 172 aaKnown RBP eCLIP17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 EIF3IQ13347 325 aaKnown RBP17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 LCN10Q6JVE6 187 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 POC1BQ8TC44 478 aa17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 SLC25A43Q8WUT9 341 aaPredicted RBP17.17■□□□□ 0.34
PDLIM3-212ENST00000620787 ZNF814B7Z6K7 855 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 CA11O75493 328 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 SCGB1D2O95969 90 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 IFNA21P01568 189 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 ZNF14P17017 642 aaPredicted RBP17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 RAB5AP20339 215 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 KCNMB1Q16558 191 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 KRBOX4Q5JUW0 171 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 APCDD1LQ8NCL9 501 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 PLPP5Q8NEB5 264 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 C20orf24Q9BUV8 137 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 WFDC1Q9HC57 220 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 A0A1B0GX78 115 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 hCG_1809904A0A1W2PP81 198 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 A0A1W2PR64 198 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 A0A1W2PRV1 198 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 RHPN2P1A8MT19 583 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 M0R036 132 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 MSTNO14793 375 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 IGLV3-1P01715 115 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 SMAD4Q13485 552 aaKnown RBP17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 SLC16A14Q7RTX9 510 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 C6orf201Q7Z4U5 140 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 ADPRHL1Q8NDY3 354 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 RLN3Q8WXF3 142 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 DECR2Q9NUI1 292 aa17.16■□□□□ 0.34
PDLIM3-212ENST00000620787 METTL12A8MUP2 240 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 EIF1BO60739 113 aaKnown RBP17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 MBPP02686 304 aaPredicted RBP17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 OR8U8P0C7N1 319 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 SEC11BP0C7V7 166 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 EIF1P41567 113 aaKnown RBP17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 GRB2P62993 217 aaKnown RBP17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 ZNF616Q08AN1 781 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 UBE2V2Q15819 145 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 PLPPR5Q32ZL2 321 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 DTX1Q86Y01 620 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 TCEAL7Q9BRU2 100 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 HDHD3Q9BSH5 251 aaPredicted RBP17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 ASXL3Q9C0F0 2248 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 SHISA7A6NL88 538 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 OR1D5P58170 312 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 CFHR1Q03591 330 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 SLC25A53Q5H9E4 307 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 Q6ZS52 159 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 RNF138Q8WVD3 245 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 PGAM5Q96HS1 289 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 MRGPRX4Q96LA9 322 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 GINS3Q9BRX5 216 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 PADI1Q9ULC6 663 aa17.15■□□□□ 0.34
PDLIM3-212ENST00000620787 TRAV20A0A0B4J274 112 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 QDPRP09417 244 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 ZNF43P17038 809 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 LMO1P25800 156 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 FHITP49789 147 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 ZNF41P51814 821 aaPredicted RBP17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 PPA1Q15181 289 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 HIST3H3Q16695 136 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 C14orf28Q4W4Y0 310 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 OR6X1Q8NH79 312 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 OR51M1Q9H341 326 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 LIME1Q9H400 295 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 A0A1W2PNR3 127 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 E5RGE8 158 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 FCGR2AP12318 317 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 ARL6IP1Q15041 203 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 D2HGDHQ8N465 521 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 TMEM156Q8N614 296 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 DEFB119Q8N690 84 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 LINC00469Q8N7U9 141 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 EIF5A2Q9GZV4 153 aaKnown RBP17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 SDHAF3Q9NRP4 125 aa17.14■□□□□ 0.33
PDLIM3-212ENST00000620787 LUZP4Q9P127 313 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms