RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ADAMTSL3P82987 1691 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 OR5B21A6NL26 309 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 SRSF10O75494 262 aaKnown RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 CRHP06850 196 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 ERVK-16P61578 105 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 RPL18Q07020 188 aaKnown RBP4.51□□□□□ -1.69
VPS13D-214ENST00000620676 Q1RN00 199 aa4.51□□□□□ -1.69
VPS13D-214ENST00000620676 VSTM2BA6NLU5 285 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 PEX11BO96011 259 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 ZNF85Q03923 595 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 MESTQ5EB52 335 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 ABCA1O95477 2261 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 C7orf66A4D0T2 115 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 CRISP2P16562 243 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 PRSS54Q6PEW0 395 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 GRINAQ7Z429 371 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 OR4A16Q8NH70 328 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 ADGRG7Q96K78 797 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 FAAP24Q9BTP7 215 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 A0A1W2PP55 124 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 DUXBA0A1W2PPF3 345 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 PRR35P0CG20 571 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 GGTA1PQ4G0N0 100 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 SLC16A14Q7RTX9 510 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 SELENOHQ8IZQ5 122 aaKnown RBP4.5□□□□□ -1.69
VPS13D-214ENST00000620676 CITED1Q99966 193 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 CMC2Q9NRP2 79 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 ZMIZ1Q9ULJ6 1067 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 NEURL1O76050 574 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 ITGBL1O95965 494 aaPredicted RBP4.5□□□□□ -1.69
VPS13D-214ENST00000620676 OR5AL1P0C617 328 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 NUTF2P61970 127 aaKnown RBP4.5□□□□□ -1.69
VPS13D-214ENST00000620676 IHHQ14623 411 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 C9orf131Q5VYM1 1079 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 SLC25A42Q86VD7 318 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 GCNT2Q8N0V5 402 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 PDXPQ96GD0 296 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TBX21Q9UL17 535 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 RPS12P25398 132 aaKnown RBP4.5□□□□□ -1.69
VPS13D-214ENST00000620676 PPP1CCP36873 323 aaKnown RBP4.5□□□□□ -1.69
VPS13D-214ENST00000620676 HTR5AP47898 357 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 GZMMP51124 257 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 DRAM2Q6UX65 266 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 KTI12Q96EK9 354 aaPredicted RBP4.5□□□□□ -1.69
VPS13D-214ENST00000620676 C16orf70Q9BSU1 422 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TCF23Q7RTU1 214 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 PLPPR2Q96GM1 343 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TRIB1Q96RU8 372 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TUBA4BQ9H853 241 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 SLIT2O94813 1529 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 NPY1RP25929 384 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TCTN1Q2MV58 587 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 ACOT6Q3I5F7 207 aaPredicted RBP4.5□□□□□ -1.69
VPS13D-214ENST00000620676 SLC38A9Q8NBW4 561 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 DMBX1Q8NFW5 382 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 MARVELD3Q96A59 401 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 ABHD14AQ9BUJ0 271 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 HIF1ANQ9NWT6 349 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 CLEC18AA5D8T8 446 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM210A6NLX4 147 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 LMX1BO60663 402 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 SEMA4FO95754 770 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 IGHA2P01877 340 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 OR1D4P47884 311 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 DOC2BQ14184 412 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TPTE2P1Q5T6R2 138 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 CDRT4Q8N9R6 151 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 CLEC18CQ8NCF0 446 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 OR5B3Q8NH48 314 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 SHISA8B8ZZ34 492 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 CD14P08571 375 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 CD22P20273 847 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 HTR1DP28221 377 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 CNN1P51911 297 aaKnown RBP4.5□□□□□ -1.69
VPS13D-214ENST00000620676 RND3P61587 244 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 FKBP1CQ5VVH2 108 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 OR2Y1Q8NGV0 311 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 DDIT4LQ96D03 193 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 BIVMQ86UB2 503 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM251Q8N6I4 163 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 Q8WTZ3 238 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TMEM208Q9BTX3 173 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 IL20Q9NYY1 176 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 FRRS1LQ9P0K9 344 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 ZDBF2Q9HCK1 2354 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 MAP1LC3B2A6NCE7 125 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 K7ERU9 68 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 UBE2CO00762 179 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 PRB4P10163 310 aaPredicted RBP4.5□□□□□ -1.69
VPS13D-214ENST00000620676 CBLN1P23435 193 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 FUT5Q11128 374 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 TCEAL8Q8IYN2 117 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 R3HDM4Q96D70 268 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 MAP1LC3BQ9GZQ8 125 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 PPP1R14DQ9NXH3 145 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 OR2J3O76001 311 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 HIST3H3Q16695 136 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 AMMECR1LQ6DCA0 310 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 ERGIC1Q969X5 290 aa4.5□□□□□ -1.69
VPS13D-214ENST00000620676 DMRTA2Q96SC8 542 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms