RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 HRH1P35367 487 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 CBX5P45973 191 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 ARFRP1Q13795 201 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 ARL6IP1Q15041 203 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 SCGB2B2Q4G0G5 96 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 MDP1Q86V88 176 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 SPICQ8N5J4 248 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 OR56B2PQ8NGI1 322 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 OR52B4Q8NGK2 314 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 SNIP1Q8TAD8 396 aaKnown RBP16.45■□□□□ 0.22
PSPC1-206ENST00000619300 ZFAND1Q8TCF1 268 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 Q96M66 194 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 ZNF436Q9C0F3 470 aaPredicted RBP16.45■□□□□ 0.22
PSPC1-206ENST00000619300 RANBP3Q9H6Z4 567 aaPredicted RBP16.45■□□□□ 0.22
PSPC1-206ENST00000619300 PLSCR3Q9NRY6 295 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 FAM172BPA6NC97 362 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 AHRRA9YTQ3 701 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 GSTT2P0CG29 244 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 IGHV1-2P23083 117 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 PDZK1IP1Q13113 114 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 HLXQ14774 488 aaPredicted RBP16.45■□□□□ 0.22
PSPC1-206ENST00000619300 ZMYND11Q15326 602 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 OR13C8Q8NGS7 320 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 OR4K15Q8NH41 348 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 ST8SIA4Q92187 359 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 SNAPC3Q92966 411 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 ZNF75AQ96N20 296 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 POFUT1Q9H488 388 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 PTTG3PQ9NZH4 202 aa16.45■□□□□ 0.22
PSPC1-206ENST00000619300 EIF3KQ9UBQ5 218 aaKnown RBP16.45■□□□□ 0.22
PSPC1-206ENST00000619300 ARHGAP21Q5T5U3 1957 aa16.44■□□□□ 0.22
PSPC1-206ENST00000619300 TMEM82A0PJX8 343 aa16.44■□□□□ 0.22
PSPC1-206ENST00000619300 SERPINE3A8MV23 424 aa16.44■□□□□ 0.22
PSPC1-206ENST00000619300 Q6ZS92 163 aa16.44■□□□□ 0.22
PSPC1-206ENST00000619300 C9orf106Q8NAJ2 232 aa16.44■□□□□ 0.22
PSPC1-206ENST00000619300 PXT1Q8NFP0 134 aa16.44■□□□□ 0.22
PSPC1-206ENST00000619300 CCDC107Q8WV48 283 aa16.44■□□□□ 0.22
PSPC1-206ENST00000619300 FBXW5Q969U6 566 aa16.44■□□□□ 0.22
PSPC1-206ENST00000619300 CYYR1Q96J86 154 aa16.44■□□□□ 0.22
PSPC1-206ENST00000619300 DLL4Q9NR61 685 aa16.44■□□□□ 0.22
PSPC1-206ENST00000619300 TNRC6AQ8NDV7 1962 aaKnown RBP16.44■□□□□ 0.22
PSPC1-206ENST00000619300 PTPRZ1P23471 2315 aaPredicted RBP16.44■□□□□ 0.22
PSPC1-206ENST00000619300 UBE2QL1A1L167 161 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 S100A1P23297 94 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 KIR2DL2P43627 348 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-206ENST00000619300 SF3B4Q15427 424 aaKnown RBP eCLIP16.43■□□□□ 0.22
PSPC1-206ENST00000619300 Q6ZT83 130 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 CCDC36Q8IYA8 594 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 CNEP1R1Q8N9A8 125 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 SLC30A7Q8NEW0 376 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 WBP1Q96G27 269 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 TMEM246Q9BRR3 403 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 PAPOLGQ9BWT3 736 aaKnown RBP16.43■□□□□ 0.22
PSPC1-206ENST00000619300 OPA3Q9H6K4 179 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 MYOZ1Q9NP98 299 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-206ENST00000619300 MGAT4CQ9UBM8 478 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 GPR160Q9UJ42 338 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 MED12LQ86YW9 2145 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 IGKV1-12A0A0C4DH73 117 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 CA11O75493 328 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 CNOT4O95628 575 aaKnown RBP16.43■□□□□ 0.22
PSPC1-206ENST00000619300 CST4P01036 141 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 IGKV1D-12P01611 117 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 PMP2P02689 132 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 IFNA6P05013 189 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 GABRR1P24046 479 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 WNT5AP41221 380 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 ACSF3Q4G176 576 aaPredicted RBP16.43■□□□□ 0.22
PSPC1-206ENST00000619300 RTL6Q6ICC9 239 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 NLRC3Q7RTR2 1065 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 CSNK2A3Q8NEV1 391 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 IL36GQ9NZH8 169 aa16.43■□□□□ 0.22
PSPC1-206ENST00000619300 CFAP47Q6ZTR5 3102 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 RGS13O14921 159 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 PRDX4Q13162 271 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 PPA1Q15181 289 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 C4orf46Q504U0 113 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 ACTBL2Q562R1 376 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 Q5BKY6 102 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 ATPAF1Q5TC12 328 aaPredicted RBP16.42■□□□□ 0.22
PSPC1-206ENST00000619300 OR2A2Q6IF42 318 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 MUC20Q8N307 709 aaPredicted RBP16.42■□□□□ 0.22
PSPC1-206ENST00000619300 OR5L1Q8NGL2 311 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 OR51F2Q8NH61 342 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 MRPS24Q96EL2 167 aaKnown RBP16.42■□□□□ 0.22
PSPC1-206ENST00000619300 PLEKHJ1Q9NW61 149 aa16.42■□□□□ 0.22
PSPC1-206ENST00000619300 PRRC2CQ9Y520 2896 aaKnown RBP16.42■□□□□ 0.22
PSPC1-206ENST00000619300 PDGFAP04085 211 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 UBE2NP61088 152 aaKnown RBP16.41■□□□□ 0.22
PSPC1-206ENST00000619300 MICBQ29980 383 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 LAMTOR1Q6IAA8 161 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 C6orf201Q7Z4U5 140 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 TMED4Q7Z7H5 227 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 HOGA1Q86XE5 327 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 FTMTQ8N4E7 242 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 PCDHB16Q9NRJ7 776 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 AKAP13Q12802 2813 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 PQLC2LA1A4F0 135 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 LYZL6O75951 148 aa16.41■□□□□ 0.22
PSPC1-206ENST00000619300 OR4E1P0C645 316 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms