RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 PLGRKTQ9HBL7 147 aa3.88□□□□□ -1.79
SYCP1-210ENST00000618516 G6PC2Q9NQR9 355 aa3.88□□□□□ -1.79
SYCP1-210ENST00000618516 CRNNQ9UBG3 495 aaPredicted RBP3.88□□□□□ -1.79
SYCP1-210ENST00000618516 IGLV3-9A0A075B6K5 115 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 PPIAL4EA0A075B759 164 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 MDFIC2A0A1B0GVS7 189 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 CCDC160A6NGH7 325 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 A8MV72 311 aaPredicted RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 PPIAL4DF5H284 164 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 MTRF1O75570 445 aaKnown RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 DHRS3O75911 302 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 OR7C1O76099 320 aaPredicted RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 PPIAL4FP0DN26 164 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 PRKACAP17612 351 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ZFP36P26651 326 aaKnown RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 DCKP27707 260 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 TGM4P49221 684 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ALKBH1Q13686 389 aaKnown RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 GALEQ14376 348 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ATXN7L3Q14CW9 347 aaPredicted RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ESCO2Q56NI9 601 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 RBM48Q5RL73 367 aaKnown RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 MEDAGQ5VYS4 303 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 SHEQ5VZ18 495 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 DMRTA1Q5VZB9 504 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 RUSC1-AS1Q66K80 236 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 IZUMO1Q8IYV9 350 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 OR52N4Q8NGI2 321 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 OR11L1Q8NGX0 322 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 OR51F2Q8NH61 342 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 CCDC107Q8WV48 283 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 TNFAIP8L1Q8WVP5 186 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ITPKCQ96DU7 683 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 BOD1Q96IK1 185 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 S100A13Q99584 98 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 FOXC2Q99958 501 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 TMEM246Q9BRR3 403 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 GSX2Q9BZM3 304 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 PPA2Q9H2U2 334 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 BEX4Q9NWD9 120 aaPredicted RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 HHLA2Q9UM44 414 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 SLC7A11Q9UPY5 501 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 AK6Q9Y3D8 172 aaKnown RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 SNX5Q9Y5X3 404 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 TRAV8-7A0A075B6U6 113 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 TRAV40A0A0B4J280 105 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ZNF816-ZNF321PA0A0X1KG74 233 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 MAGEB3O15480 346 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 PLXNB1O43157 2135 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 RGS10O43665 173 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 PTBP3O95758 552 aaKnown RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 HOXB6P17509 224 aaKnown RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 GABRB1P18505 474 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 NFYBP25208 207 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 HSPA13P48723 471 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ZNF133P52736 654 aaPredicted RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 PPP3R1P63098 170 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 RAB40BQ12829 278 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 KLRD1Q13241 179 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 KLHL22Q53GT1 634 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 FOXL2NBQ6ZUU3 175 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 C1QL2Q7Z5L3 287 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 GCSAMQ8N6F7 178 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 OR1M1Q8NGA1 313 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 TRUB1Q8WWH5 349 aaKnown RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ASB17Q8WXJ9 295 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 EMG1Q92979 244 aaKnown RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 LEAP2Q969E1 77 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 C1orf159Q96HA4 380 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 CHCHD6Q9BRQ6 235 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 RTL8AQ9BWD3 113 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 TRIM36Q9NQ86 728 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ZNF701Q9NV72 531 aaPredicted RBP3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ETAA1Q9NY74 926 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 ENPP5Q9UJA9 477 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 LRCH1Q9Y2L9 728 aa3.87□□□□□ -1.79
SYCP1-210ENST00000618516 PLPP2O43688 288 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 AVPP01185 164 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 IGHA1P01876 353 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 APOC1P02654 83 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 CD2P06729 351 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 BCL3P20749 454 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 ACHEP22303 614 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 CD24P25063 80 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 AZGP1P25311 298 aaKnown RBP3.86□□□□□ -1.79
SYCP1-210ENST00000618516 OR3A4PP47883 348 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 SNRPGP62308 76 aaKnown RBP3.86□□□□□ -1.79
SYCP1-210ENST00000618516 RPS25P62851 125 aaKnown RBP3.86□□□□□ -1.79
SYCP1-210ENST00000618516 ACTC1P68032 377 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 ACTA1P68133 377 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 P2RY14Q15391 338 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 SPHARQ15513 63 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 KCNMB1Q16558 191 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 TAF9Q16594 264 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 MOGQ16653 247 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 PCK2Q16822 640 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 PIGYQ3MUY2 71 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 NRN1LQ496H8 165 aa3.86□□□□□ -1.79
SYCP1-210ENST00000618516 RNASE12Q5GAN4 147 aaKnown RBP3.86□□□□□ -1.79
SYCP1-210ENST00000618516 MBNL2Q5VZF2 373 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms