RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 OR52W1Q6IF63 320 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 ACP7Q6ZNF0 438 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 Q6ZS46 218 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 CPLX4Q7Z7G2 160 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 FAM185AQ8N0U4 392 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 SMYD1Q8NB12 490 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 TFAP2CQ92754 450 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 Q96M85 177 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 SLC25A33Q9BSK2 321 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 NCOR1P1Q9H4R4 102 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 LINC00312Q9Y6C7 94 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 DYNC1H1Q14204 4646 aaKnown RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 ZNF878C9JN71 531 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 SPAG7O75391 227 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 E2F6O75461 281 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 IGLV3-1P01715 115 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 OR8U8P0C7N1 319 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 FRMD6-AS1P0C7T7 363 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 GNALP38405 381 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 OR3A4PP47883 348 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 RPL31P62899 125 aaKnown RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 IKZF1Q13422 519 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 LDLRAD2Q5SZI1 272 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 LHFPL4Q7Z7J7 247 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 OR13C2Q8NGS9 318 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 ZNF671Q8TAW3 534 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 ZNF596Q8TC21 504 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 UBLCP1Q8WVY7 318 aaPredicted RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 PRR25Q96S07 402 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 CGREF1Q99674 301 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 NRIP2Q9BQI9 281 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 SYT4Q9H2B2 425 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 DCAF13Q9NV06 445 aaKnown RBP3.6□□□□□ -1.83
SNCA-213ENST00000618500 DNAJB11Q9UBS4 358 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 POLR1DQ9Y2S0 133 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 WNK2Q9Y3S1 2297 aa3.6□□□□□ -1.83
SNCA-213ENST00000618500 IGHV2-26A0A0B4J1V2 119 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 A0A1W2PRQ8 180 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 ANXA2P2A6NMY6 339 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 DNAJC8O75937 253 aaPredicted RBP3.59□□□□□ -1.83
SNCA-213ENST00000618500 TK1P04183 234 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 CEACAM3P40198 252 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 ECI1P42126 302 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 DGCR6Q14129 220 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 MPP2Q14168 576 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 CYP51A1Q16850 503 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 TMEM95Q3KNT9 176 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 LCE3BQ5TA77 95 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 RPL13AP3Q6NVV1 102 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 C1orf94Q6P1W5 598 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 PTCHD4Q6ZW05 846 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 DHDDSQ86SQ9 333 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 IZUMO1Q8IYV9 350 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 C5orf56Q8N8D9 126 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 BOLLQ8N9W6 283 aaKnown RBP3.59□□□□□ -1.83
SNCA-213ENST00000618500 OR5A2Q8NGI9 324 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 OR4P4Q8NGL7 312 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 OR6Q1Q8NGQ2 317 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 RSRC1Q96IZ7 334 aaKnown RBP3.59□□□□□ -1.83
SNCA-213ENST00000618500 C7orf26Q96N11 449 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 PITX2Q99697 317 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 CLEC7AQ9BXN2 247 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 NUAK2Q9H093 628 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 TMEM133Q9H2Q1 129 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 NIPAL2Q9H841 368 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 MRPL22Q9NWU5 206 aaKnown RBP3.59□□□□□ -1.83
SNCA-213ENST00000618500 WNK1Q9H4A3 2382 aa3.59□□□□□ -1.83
SNCA-213ENST00000618500 TRAV27A0A087WT01 109 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 SEC14L6B5MCN3 397 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 K7N7A8 449 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 SLC1A7O00341 560 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 IGLV1-47P01700 117 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 IFNA6P05013 189 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 ZNF728P0DKX0 622 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 GP9P14770 177 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 NDUFB7P17568 137 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 HTR1DP28221 377 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 CDKN2AP42771 156 aaKnown RBP3.59□□□□□ -1.84
SNCA-213ENST00000618500 OMPP47874 163 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 FXYD6P3P58550 94 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 ERVK11-1P61568 191 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 GNG3P63215 75 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 CEACAM21Q3KPI0 293 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 LINC00322Q6ZN03 302 aaPredicted RBP3.59□□□□□ -1.84
SNCA-213ENST00000618500 TMEM219Q86XT9 240 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 SGPP2Q8IWX5 399 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 ENTHD1Q8IYW4 607 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 KLHL30-AS1Q8NEE0 82 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 GATAD1Q8WUU5 269 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 CAPSLQ8WWF8 208 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 HPSE2Q8WWQ2 592 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 AQP3Q92482 292 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 PKIBQ9C010 78 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 FGF23Q9GZV9 251 aaPredicted RBP3.59□□□□□ -1.84
SNCA-213ENST00000618500 OR10A2Q9H208 303 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 TAS2R3Q9NYW6 316 aa3.59□□□□□ -1.84
SNCA-213ENST00000618500 FAT2Q9NYQ8 4349 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 A0A1W2PRD5 423 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 A0A1W2PRF3 423 aa3.58□□□□□ -1.84
SNCA-213ENST00000618500 A0A1W2PRM7 423 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms