RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 SOCS1O15524 211 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 SSX5O60225 188 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 CDC14BO60729 498 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 SYNGR4O95473 234 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 MELTFP08582 738 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 ZNF735P0CB33 412 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 PABPC1L2AQ5JQF8 200 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 ALKAL2Q6UX46 152 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 TMEM178AQ8NBL3 297 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 OR52H1Q8NGJ2 320 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 SCARB1Q8WTV0 552 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 NUDCD2Q8WVJ2 157 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 REEP6Q96HR9 211 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 SELENOIQ9C0D9 397 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 OR10A2Q9H208 303 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 SCPEP1Q9HB40 452 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 SDHAF2Q9NX18 166 aa15.21■□□□□ 0.02
CNOT3-209ENST00000617930 MCTS1Q9ULC4 181 aaKnown RBP15.21■□□□□ 0.02
CNOT3-209ENST00000617930 LOC105371267A0A1B0GV96 52 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 TMEM82A0PJX8 343 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 METTL21EPA6NDL7 271 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 LCATP04180 440 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 AMY2AP04746 511 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 NAT2P11245 290 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 GSG1LQ6UXU4 331 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 TMED4Q7Z7H5 227 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 FJX1Q86VR8 437 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 GALNT11Q8NCW6 608 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 ASB13Q8WXK3 278 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 PIGTQ969N2 578 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 CXorf58Q96LI9 332 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 PRRG4Q9BZD6 226 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 CHST6Q9GZX3 395 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 COQ3Q9NZJ6 369 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 PFDN2Q9UHV9 154 aa15.2■□□□□ 0.02
CNOT3-209ENST00000617930 LOC100509620A0A075B734 347 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 ZNF724A8MTY0 619 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 MPIG6BO95866 241 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 ACTL6AO96019 429 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 CYB5AP00167 134 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 APOC1P02654 83 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 EDN3P14138 238 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 PTGFRP43088 359 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 SORDQ00796 357 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 ZNF92Q03936 586 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 CHST4Q8NCG5 386 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 OR10R2Q8NGX6 335 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 GPR173Q9NS66 373 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 PTPRQQ9UMZ3 2332 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 IGKV1-27A0A075B6S5 117 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 POM121CA8CG34 1229 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 RAD51DO75771 328 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 HLA-HP01893 362 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 OR4E1P0C645 316 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 ZP3P21754 424 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 CAPZA1P52907 286 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 RAB12Q6IQ22 244 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 C12orf45Q8N5I9 185 aaPredicted RBP15.19■□□□□ 0.02
CNOT3-209ENST00000617930 OR10K1Q8NGX5 313 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 PP6455Q8WZ26 134 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 TAAR6Q96RI8 345 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 RNF122Q9H9V4 155 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 PRSS50Q9UI38 385 aa15.19■□□□□ 0.02
CNOT3-209ENST00000617930 TRGV5A0A0B4J1U4 118 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 H3BUI4 141 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 CD74P04233 296 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 CCL2P13500 99 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 NRN1LQ496H8 165 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 OR52W1Q6IF63 320 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 OR2W3Q7Z3T1 314 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 SEMA6DQ8NFY4 1073 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 GPER1Q99527 375 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 SLC25A21Q9BQT8 299 aaPredicted RBP15.18■□□□□ 0.02
CNOT3-209ENST00000617930 ALX4Q9H161 411 aaPredicted RBP15.18■□□□□ 0.02
CNOT3-209ENST00000617930 LDAHQ9H6V9 325 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 PARPBPQ9NWS1 579 aa15.18■□□□□ 0.02
CNOT3-209ENST00000617930 NCOR2Q9Y618 2525 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 MFSD2BA6NFX1 497 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 FOXI3A8MTJ6 420 aaPredicted RBP15.17■□□□□ 0.02
CNOT3-209ENST00000617930 ZNF736B4DX44 427 aaPredicted RBP15.17■□□□□ 0.02
CNOT3-209ENST00000617930 NMBP08949 121 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 FCGR2AP12318 317 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 ALDH3B1P43353 468 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 PCBD1P61457 104 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 FAM3AP98173 230 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 SCGB2B2Q4G0G5 96 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 SMUG1Q53HV7 270 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 TRAPPC6BQ86SZ2 158 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 STEAP2Q8NFT2 490 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 MRGPRFQ96AM1 343 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 REG4Q9BYZ8 158 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 MFFQ9GZY8 342 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 ZZEF1O43149 2961 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 MTRF1O75570 445 aaKnown RBP15.17■□□□□ 0.02
CNOT3-209ENST00000617930 RGS7BPQ6MZT1 257 aaPredicted RBP15.17■□□□□ 0.02
CNOT3-209ENST00000617930 ZNF584Q8IVC4 421 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 BPIFB2Q8N4F0 458 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 KCNG3Q8TAE7 436 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 APH1AQ96BI3 265 aa15.17■□□□□ 0.02
CNOT3-209ENST00000617930 WBP1Q96G27 269 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms