RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 TWIST1Q15672 202 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 C3orf30Q96M34 536 aa8.41□□□□□ -1.06
COL12A1-211ENST00000615798 CSO75390 466 aaKnown RBP8.4□□□□□ -1.06
COL12A1-211ENST00000615798 FOLR2P14207 255 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 ALOX5APP20292 161 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 NR2C2APQ86WQ0 139 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 SPPL3Q8TCT6 385 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 PIGCQ92535 297 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 SPHK2Q9NRA0 654 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 A0A1B0GTW7 788 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 FCGR2AP12318 317 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 CYBAP13498 195 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 RPS15P62841 145 aaKnown RBP8.4□□□□□ -1.06
COL12A1-211ENST00000615798 OLIG2Q13516 323 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 TEAD2Q15562 447 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 CYB561A3Q8NBI2 242 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 CYSLTR1Q9Y271 337 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 IAPPP10997 89 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 RNF113BQ8IZP6 322 aaKnown RBP8.4□□□□□ -1.06
COL12A1-211ENST00000615798 CMTM8Q8IZV2 173 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 OR52I2Q8NH67 350 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 LINC00862A6NCI5 91 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 MOGAT3Q86VF5 341 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 CBLN2Q8IUK8 224 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 FAM174AQ8TBP5 190 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 ERGIC1Q969X5 290 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 KTI12Q96EK9 354 aaPredicted RBP8.4□□□□□ -1.06
COL12A1-211ENST00000615798 ZNF714Q96N38 554 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 SLC45A2Q9UMX9 530 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 MASP2O00187 686 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 FUT1P19526 365 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 SCD5Q86SK9 330 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 C1orf43Q9BWL3 253 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 ALX4Q9H161 411 aaPredicted RBP8.4□□□□□ -1.06
COL12A1-211ENST00000615798 A1L4Q6 167 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 CSN3P07498 182 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 OR1P1Q8NH06 330 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 GHSRQ92847 366 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 TMEM19Q96HH6 336 aa8.4□□□□□ -1.06
COL12A1-211ENST00000615798 LOC390937A0A1W2PQ73 354 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 MBPP02686 304 aaPredicted RBP8.4□□□□□ -1.07
COL12A1-211ENST00000615798 SNRPGP62308 76 aaKnown RBP8.4□□□□□ -1.07
COL12A1-211ENST00000615798 PITX1P78337 314 aaPredicted RBP8.4□□□□□ -1.07
COL12A1-211ENST00000615798 TRMT12Q53H54 448 aaKnown RBP8.4□□□□□ -1.07
COL12A1-211ENST00000615798 SAXO2Q658L1 398 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 COMMD6Q7Z4G1 85 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 UBE2FQ969M7 185 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 CBLN4Q9NTU7 201 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 DIMT1Q9UNQ2 313 aaKnown RBP8.4□□□□□ -1.07
COL12A1-211ENST00000615798 HSPB6O14558 160 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 KLK8O60259 260 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 CLDN18P56856 261 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 MANEAQ5SRI9 462 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 OR52I1Q8NGK6 324 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 KHSRPQ92945 711 aaKnown RBP eCLIP8.4□□□□□ -1.07
COL12A1-211ENST00000615798 TRBV23OR9-2A0A075B6M9 112 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 SDC1P18827 310 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 ID2Q02363 134 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 OR52E5Q8NH55 327 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 ZNF502Q8TBZ5 544 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 SLC2A4RGQ9NR83 387 aa8.4□□□□□ -1.07
COL12A1-211ENST00000615798 A0A1W2PRU2 124 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 CCL16O15467 120 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 GPX2P18283 190 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 SELENBP1Q13228 472 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 OR8B2Q96RD0 313 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 MEGF9Q9H1U4 602 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 ZDHHC8Q9ULC8 765 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 GPR55Q9Y2T6 319 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-211ENST00000615798 CASP8AP2Q9UKL3 1982 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 UBE2MP61081 183 aaKnown RBP8.39□□□□□ -1.07
COL12A1-211ENST00000615798 C5orf17Q8NAS9 161 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 POC1AQ8NBT0 407 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 P2RY12Q9H244 342 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 WNK3Q9BYP7 1800 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 ABOP16442 354 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 KLF3P57682 345 aaPredicted RBP8.39□□□□□ -1.07
COL12A1-211ENST00000615798 PARS2Q7L3T8 475 aaKnown RBP8.39□□□□□ -1.07
COL12A1-211ENST00000615798 DAZLQ92904 295 aaKnown RBP8.39□□□□□ -1.07
COL12A1-211ENST00000615798 HES7Q9BYE0 225 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 FBXL17Q9UF56 701 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 PGA4P0DJD7 388 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 PGA5P0DJD9 388 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 CTAG1AP78358 180 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 Q499Y3 187 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 TMEM108Q6UXF1 575 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 MAMSTRQ6ZN01 415 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 HS3ST2Q9Y278 367 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 ST6GAL1P15907 406 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 SNRPNP63162 240 aaKnown RBP8.39□□□□□ -1.07
COL12A1-211ENST00000615798 DCDP81605 110 aaKnown RBP8.39□□□□□ -1.07
COL12A1-211ENST00000615798 OR5D18Q8NGL1 313 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 ZFYVE21Q9BQ24 234 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 ADAP1O75689 374 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 STATHP02808 62 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 SOD3P08294 240 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 KHDC3LQ587J8 217 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 C19orf54Q5BKX5 351 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 TXNDC8Q6A555 127 aa8.39□□□□□ -1.07
COL12A1-211ENST00000615798 DEFB118Q96PH6 123 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms