RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 DCTN5Q9BTE1 182 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 RBFOX1Q9NWB1 397 aaKnown RBP4.71□□□□□ -1.65
CPNE3-208ENST00000614678 CDC42EP3Q9UKI2 254 aa4.71□□□□□ -1.65
CPNE3-208ENST00000614678 RRP15Q9Y3B9 282 aaKnown RBP4.71□□□□□ -1.65
CPNE3-208ENST00000614678 FBN3Q75N90 2809 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 RFPL4AA6NLU0 287 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 RFPL4AL1F8VTS6 287 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 J3QW42 95 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 SLC16A6O15403 523 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 KRT8P05787 483 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 PITPNBP48739 271 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 DVL1P1P54792 670 aaPredicted RBP4.71□□□□□ -1.66
CPNE3-208ENST00000614678 CDONQ4KMG0 1287 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 LCN1P1Q5VSP4 162 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 FAM53AQ6NSI3 398 aaPredicted RBP4.71□□□□□ -1.66
CPNE3-208ENST00000614678 RTN4RL2Q86UN3 420 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 PLPP7Q8NBV4 271 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 OR51F2Q8NH61 342 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 Q8TCH9 128 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 DNAJC9Q8WXX5 260 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 AQP3Q92482 292 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 ADI1Q9BV57 179 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 OR14J1Q9UGF5 321 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 EXOGQ9Y2C4 368 aaKnown RBP4.71□□□□□ -1.66
CPNE3-208ENST00000614678 V9GYS6 101 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 A0A0U1RQV5 110 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 OR4C45A6NMZ5 311 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 SYT7O43581 403 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 PSG2P11465 335 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 VHLP40337 213 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 GABRA2P47869 451 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 EGR3Q06889 387 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 SRSF4Q08170 494 aaKnown RBP4.71□□□□□ -1.66
CPNE3-208ENST00000614678 FAM27D1Q5T7N8 215 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 PEG10Q86TG7 708 aaKnown RBP4.71□□□□□ -1.66
CPNE3-208ENST00000614678 C10orf67Q8IYJ2 551 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.71□□□□□ -1.66
CPNE3-208ENST00000614678 BPIFB6Q8NFQ5 453 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 OR13C9Q8NGT0 318 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 HPS1Q92902 700 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 GAFA1Q96PS6 74 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 DIRC2Q96SL1 478 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 CHST6Q9GZX3 395 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 FN3KRPQ9HA64 309 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 CLN8Q9UBY8 286 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 CGGBP1Q9UFW8 167 aaPredicted RBP4.71□□□□□ -1.66
CPNE3-208ENST00000614678 ORC6Q9Y5N6 252 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 INSIG2Q9Y5U4 225 aa4.71□□□□□ -1.66
CPNE3-208ENST00000614678 ZNF816-ZNF321PA0A0X1KG74 233 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 A0A1W2PP11 408 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 SRRM5B3KS81 715 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 CST4P01036 141 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 IGHA1P01876 353 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 EPHA1P21709 976 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 GNALP38405 381 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 CEACAM21Q3KPI0 293 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 AHSA2Q719I0 299 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 RHOUQ7L0Q8 258 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 PIP4P2Q8N4L2 257 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 OR10K1Q8NGX5 313 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 TBX15Q96SF7 602 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 TEX12Q9BXU0 123 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 NOTCH1P46531 2555 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 PQLC2LA1A4F0 135 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 FAM172BPA6NC97 362 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 PTGES3LE9PB15 166 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 OMGP23515 440 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 ESCO2Q56NI9 601 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM42Q69YG0 159 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 STUMQ69YW2 141 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 BRICD5Q6PL45 260 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 ACBD7Q8N6N7 88 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 Q8N7P7 452 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 ANGPTL6Q8NI99 470 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 ASB17Q8WXJ9 295 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 OR5M11Q96RB7 305 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 TLNRD1Q9H1K6 362 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 PPIL3Q9H2H8 161 aaKnown RBP4.7□□□□□ -1.66
CPNE3-208ENST00000614678 C19orf12Q9NSK7 152 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 ZNRD1Q9P1U0 126 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.7□□□□□ -1.66
CPNE3-208ENST00000614678 SNX5Q9Y5X3 404 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 A0A0G2JMP0 313 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 A0A0X1KG70 313 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 ACOD1A6NK06 481 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 OR2AT4A6NND4 320 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 RNF212BA8MTL3 300 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 LGALS8O00214 317 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 CCL3L1P16619 93 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 GLRA1P23415 457 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 MAP2K3P46734 347 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 POU3F4P49335 361 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 RIPPLY1Q0D2K3 151 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 IL18R1Q13478 541 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 GALEQ14376 348 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 ZNF829Q3KNS6 432 aaPredicted RBP4.7□□□□□ -1.66
CPNE3-208ENST00000614678 TMEM155Q4W5P6 130 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 FBLN7Q53RD9 439 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 DEGS2Q6QHC5 323 aa4.7□□□□□ -1.66
CPNE3-208ENST00000614678 SLC25A26Q70HW3 274 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms