RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 H7BYZ3 331 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 LIMS1P48059 325 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 TMEM268Q5VZI3 342 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 RTN4IP1Q8WWV3 396 aaPredicted RBP13.12□□□□□ -0.31
SNPH-203ENST00000614659 SLC23A1Q9UHI7 598 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 FAM96BQ9Y3D0 163 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 C5orf49A4QMS7 147 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 F6UZH7 168 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 OR6X1Q8NH79 312 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 DNASE2BQ8WZ79 361 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 TAAR6Q96RI8 345 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 FOXB1Q99853 325 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 ST3GAL6Q9Y274 331 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 EPOPA6NHQ4 379 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 DTYMKP23919 212 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 SURF2Q15527 256 aaPredicted RBP13.12□□□□□ -0.31
SNPH-203ENST00000614659 WIPI1Q5MNZ9 446 aaPredicted RBP13.12□□□□□ -0.31
SNPH-203ENST00000614659 ADGRG3Q86Y34 549 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 SUMF1Q8NBK3 374 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 PIK3IP1Q96FE7 263 aa13.12□□□□□ -0.31
SNPH-203ENST00000614659 PARP12Q9H0J9 701 aaKnown RBP13.12□□□□□ -0.31
SNPH-203ENST00000614659 RPA2P15927 270 aa13.11□□□□□ -0.31
SNPH-203ENST00000614659 MVDP53602 400 aa13.11□□□□□ -0.31
SNPH-203ENST00000614659 H3F3AP84243 136 aa13.11□□□□□ -0.31
SNPH-203ENST00000614659 NUFIP2Q7Z417 695 aaKnown RBP13.11□□□□□ -0.31
SNPH-203ENST00000614659 TINAGL1Q9GZM7 467 aaPredicted RBP13.11□□□□□ -0.31
SNPH-203ENST00000614659 SDCBPO00560 298 aaPredicted RBP13.11□□□□□ -0.31
SNPH-203ENST00000614659 FUT3P21217 361 aa13.11□□□□□ -0.31
SNPH-203ENST00000614659 OR2B8PP59922 312 aa13.11□□□□□ -0.31
SNPH-203ENST00000614659 SMIM15Q7Z3B0 74 aa13.11□□□□□ -0.31
SNPH-203ENST00000614659 OR5M9Q8NGP3 310 aa13.11□□□□□ -0.31
SNPH-203ENST00000614659 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.11□□□□□ -0.31
SNPH-203ENST00000614659 ZNF71Q9NQZ8 489 aaPredicted RBP13.11□□□□□ -0.31
SNPH-203ENST00000614659 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
SNPH-203ENST00000614659 PATE3B3GLJ2 98 aa13.11□□□□□ -0.31
SNPH-203ENST00000614659 INHBBP09529 407 aa13.11□□□□□ -0.31
SNPH-203ENST00000614659 RPUSD3Q6P087 351 aaKnown RBP13.11□□□□□ -0.31
SNPH-203ENST00000614659 RPH3ALQ9UNE2 315 aa13.11□□□□□ -0.31
SNPH-203ENST00000614659 GPR31O00270 319 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 CELA2BP08218 269 aaPredicted RBP13.1□□□□□ -0.31
SNPH-203ENST00000614659 ANKRD34CP0C6C1 535 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 ACKR3P25106 362 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 CALCRP30988 508 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 HLXQ14774 488 aaPredicted RBP13.1□□□□□ -0.31
SNPH-203ENST00000614659 ABHD1Q96SE0 405 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 DSPPQ9NZW4 1301 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 FAM90A27PA6NNH2 459 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 INSL4Q14641 139 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 KRTCAP3Q53RY4 240 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 LYPD8Q6UX82 237 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 ZDHHC16Q969W1 377 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 TRAF4Q9BUZ4 470 aaPredicted RBP13.1□□□□□ -0.31
SNPH-203ENST00000614659 HEYLQ9NQ87 328 aaPredicted RBP13.1□□□□□ -0.31
SNPH-203ENST00000614659 HS3ST1O14792 307 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 CST4P01036 141 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 RFC3P40938 356 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 SKP2Q13309 424 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 HES1Q14469 280 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 TM4SF19Q96DZ7 209 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 KIAA1456Q9P272 454 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 ZMAT5Q9UDW3 170 aaKnown RBP13.1□□□□□ -0.31
SNPH-203ENST00000614659 TMED3Q9Y3Q3 217 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 PTP4A3O75365 173 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 DUS4LO95620 317 aaKnown RBP13.1□□□□□ -0.31
SNPH-203ENST00000614659 PEBP1P30086 187 aaKnown RBP13.1□□□□□ -0.31
SNPH-203ENST00000614659 MESTQ5EB52 335 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 SPACA5Q96QH8 159 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 RAB1BQ9H0U4 201 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 FSCN3Q9NQT6 498 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 MMP26Q9NRE1 261 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 MED9Q9NWA0 146 aa13.1□□□□□ -0.31
SNPH-203ENST00000614659 PRR33A8MZF0 331 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 PRKNO60260 465 aaPredicted RBP13.09□□□□□ -0.31
SNPH-203ENST00000614659 NGFRP08138 427 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 DBX2Q6ZNG2 339 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 ROBO4Q8WZ75 1007 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 PTP4A1Q93096 173 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 CDC14BO60729 498 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 SULT1A3P0DMM9 295 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 SULT1A4P0DMN0 295 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 CD37P11049 281 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 FAHP16930 419 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 GLRA1P23415 457 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 FABP6P51161 128 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 LSM6P62312 80 aaKnown RBP13.09□□□□□ -0.31
SNPH-203ENST00000614659 SMIM21Q3B7S5 101 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 B3GNTL1Q67FW5 361 aaPredicted RBP13.09□□□□□ -0.31
SNPH-203ENST00000614659 TMEM88Q6PEY1 159 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.09□□□□□ -0.31
SNPH-203ENST00000614659 MRGPREQ86SM8 312 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 MUC20Q8N307 709 aaPredicted RBP13.09□□□□□ -0.31
SNPH-203ENST00000614659 HGDQ93099 445 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 MCHR2Q969V1 340 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 ZNF355PQ9NSJ1 428 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 C9orf170A2RU37 121 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 NXPH3O95157 252 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 ACSM4P0C7M7 580 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 MDH2P40926 338 aaKnown RBP13.09□□□□□ -0.31
SNPH-203ENST00000614659 PTGFRP43088 359 aa13.09□□□□□ -0.31
SNPH-203ENST00000614659 NPBWR1P48145 328 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms