RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 CPEB2Q7Z5Q1 589 aaKnown RBP12.32□□□□□ -0.44
COL6A1-207ENST00000612273 WDSUB1Q8N9V3 476 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 OR5T2Q8NGG2 359 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 FNDC9Q8TBE3 224 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 ERGIC1Q969X5 290 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 C14orf79Q96F83 325 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 MRGPRX4Q96LA9 322 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 NRIP2Q9BQI9 281 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 RCL1Q9Y2P8 373 aaKnown RBP12.32□□□□□ -0.44
COL6A1-207ENST00000612273 ZNF175Q9Y473 711 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 PCDHGA1Q9Y5H4 931 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 RAB19A4D1S5 217 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 NPIPA2E9PIF3 369 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 NPIPA3F8WFD2 350 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 HSPB6O14558 160 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 OMGP23515 440 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 FPR2P25090 351 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 TMEM33P57088 247 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 DCDP81605 110 aaKnown RBP12.32□□□□□ -0.44
COL6A1-207ENST00000612273 KRBOX4Q5JUW0 171 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 RAB11FIP2Q7L804 512 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 OR14K1Q8NGZ2 314 aa12.32□□□□□ -0.44
COL6A1-207ENST00000612273 EIF5A2Q9GZV4 153 aaKnown RBP12.32□□□□□ -0.44
COL6A1-207ENST00000612273 PNRC2Q9NPJ4 139 aaKnown RBP12.32□□□□□ -0.44
COL6A1-207ENST00000612273 ZNF107Q9UII5 783 aaPredicted RBP12.32□□□□□ -0.44
COL6A1-207ENST00000612273 SNAPINO95295 136 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 PEA15Q15121 130 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 FAHD2BQ6P2I3 314 aaPredicted RBP12.31□□□□□ -0.44
COL6A1-207ENST00000612273 AKR7LQ8NHP1 331 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 FAHD2AQ96GK7 314 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 UCK1Q9HA47 277 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 RAB18Q9NP72 206 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 RARRES3Q9UL19 164 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 DIDO1Q9BTC0 2240 aaKnown RBP12.31□□□□□ -0.44
COL6A1-207ENST00000612273 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 C3orf80F5H4A9 247 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 FGF16O43320 207 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 LCATP04180 440 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 ZNF708P17019 499 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 CCNOP22674 350 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 RAB13P51153 203 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 GPR85P60893 370 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 SRSF4Q08170 494 aaKnown RBP12.31□□□□□ -0.44
COL6A1-207ENST00000612273 SPEM2Q0P670 501 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 ESPL1Q14674 2120 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 OR11L1Q8NGX0 322 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 ALKBH3Q96Q83 286 aaPredicted RBP12.31□□□□□ -0.44
COL6A1-207ENST00000612273 SLC5A7Q9GZV3 580 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 LIME1Q9H400 295 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 OCIAD1Q9NX40 245 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 PLA2G2EQ9NZK7 142 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 M0R135 149 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 TLX3O43711 291 aaPredicted RBP12.31□□□□□ -0.44
COL6A1-207ENST00000612273 IFNA2P01563 188 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 OR5H8P0DN80 308 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 CPT2P23786 658 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 F2RL1P55085 397 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 PIGPP57054 158 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 SNRPEP62304 92 aaKnown RBP12.31□□□□□ -0.44
COL6A1-207ENST00000612273 CCL7P80098 99 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 SMCO1Q147U7 214 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 PIGYQ3MUY2 71 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 GGNBP1Q5YKI7 109 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 SLC25A47Q6Q0C1 308 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 SGPP2Q8IWX5 399 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 OR2M3Q8NG83 312 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 OR5L2Q8NGL0 311 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 ZNF799Q96GE5 643 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 OXGR1Q96P68 337 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 CLCC1Q96S66 551 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 PIGQQ9BRB3 760 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 MMP26Q9NRE1 261 aa12.31□□□□□ -0.44
COL6A1-207ENST00000612273 A0A1W2PQM1 296 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 F8VVB4 439 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 F8VWA3 439 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 TNFSF11O14788 317 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 TNFSF12O43508 249 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 CD37P11049 281 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 CD79AP11912 226 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 ACKR3P25106 362 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 PTGDSP41222 190 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 RSU1Q15404 277 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 ABCA11PQ4W5N1 156 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 Q7L0L9 218 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 LYZL2Q7Z4W2 148 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 HKR1P10072 659 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 CCL3P10147 92 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 AFF3P51826 1226 aaKnown RBP12.3□□□□□ -0.44
COL6A1-207ENST00000612273 VAX1Q5SQQ9 334 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 DHRS11Q6UWP2 260 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 CD300LFQ8TDQ1 290 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 ULBP2Q9BZM5 246 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 FBXO7Q9Y3I1 522 aa12.3□□□□□ -0.44
COL6A1-207ENST00000612273 SCGNO76038 276 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 OR5AC1P0C628 307 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 TBPP20226 339 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 ADH6P28332 368 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 UQCC3Q6UW78 93 aa12.29□□□□□ -0.44
COL6A1-207ENST00000612273 YRDCQ86U90 279 aaKnown RBP12.29□□□□□ -0.44
COL6A1-207ENST00000612273 TMEM156Q8N614 296 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms