RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 IGSF11Q5DX21 431 aa13.27□□□□□ -0.28
PCDHGB1-202ENST00000611598 OR14K1Q8NGZ2 314 aa13.27□□□□□ -0.28
PCDHGB1-202ENST00000611598 MVB12AQ96EY5 273 aa13.27□□□□□ -0.28
PCDHGB1-202ENST00000611598 LYZL4Q96KX0 146 aa13.27□□□□□ -0.28
PCDHGB1-202ENST00000611598 SEBOXQ9HB31 216 aaPredicted RBP13.27□□□□□ -0.28
PCDHGB1-202ENST00000611598 ADAMTS9Q9P2N4 1935 aa13.27□□□□□ -0.28
PCDHGB1-202ENST00000611598 A0A1W2PNV4 684 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 ARG1P05089 322 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 NAT2P11245 290 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 ZNF14P17017 642 aaPredicted RBP13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 CCL1P22362 96 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 ARL4DP49703 201 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 OR1D5P58170 312 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 POLR2GP62487 172 aaKnown RBP eCLIP13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 OPN5Q6U736 354 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 UEVLDQ8IX04 471 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 ZNF561Q8N587 486 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 SLC25A43Q8WUT9 341 aaPredicted RBP13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 TCEAL3Q969E4 200 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 ZDHHC12Q96GR4 267 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 LIME1Q9H400 295 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 RGCCQ9H4X1 137 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 UCK1Q9HA47 277 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 ELL3Q9HB65 397 aaPredicted RBP13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 WFDC1Q9HC57 220 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 TUBD1Q9UJT1 453 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 TRAF3IP2O43734 574 aaPredicted RBP13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 IGHG1P01857 330 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 FAM3AP98173 230 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 CFHR1Q03591 330 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 GUK1Q16774 197 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 SP6Q3SY56 376 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 RNF212Q495C1 297 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 DOK3Q7L591 496 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 SULF2Q8IWU5 870 aa13.27□□□□□ -0.29
PCDHGB1-202ENST00000611598 A0A1B0GV50 99 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 TXNL1O43396 289 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 NQO2P16083 231 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 OR2B8PP59922 312 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 SURF2Q15527 256 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 UBE2V2Q15819 145 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 CDCP2Q5VXM1 449 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 FAM24BQ8N5W8 94 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 UBAC2Q8NBM4 344 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 APCDD1LQ8NCL9 501 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 TPSD1Q9BZJ3 242 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 EIF5A2Q9GZV4 153 aaKnown RBP13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 NCOA6Q14686 2063 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 XRCC2O43543 280 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 OR8U8P0C7N1 319 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 GLI4P10075 376 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 NME1P15531 152 aaKnown RBP13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 FAHP16930 419 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 RAB5AP20339 215 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 GABRR1P24046 479 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 SMAD4Q13485 552 aaKnown RBP13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 SLC25A47Q6Q0C1 308 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 LURAP1LQ8IV03 231 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 SGPP2Q8IWX5 399 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 TMEM156Q8N614 296 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 POC1BQ8TC44 478 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 PIGTQ969N2 578 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 CHRNA10Q9GZZ6 450 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 SH3BGRL3Q9H299 93 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 FAM212BQ9NTI7 297 aaPredicted RBP13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 ZNF581Q9P0T4 197 aa13.26□□□□□ -0.29
PCDHGB1-202ENST00000611598 CNTRLQ7Z7A1 2325 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 BRWD1Q9NSI6 2320 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 A0A1W2PPE2 198 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 CRYM-AS1A6NIL9 109 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 EIF1BO60739 113 aaKnown RBP13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 DIRAS3O95661 229 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 MBPP02686 304 aaPredicted RBP13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 QDPRP09417 244 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 EIF1P41567 113 aaKnown RBP13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 NSUN5P2Q63ZY6 315 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 METTL1Q9UBP6 276 aaKnown RBP13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 MIOXQ9UGB7 285 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 RALGAPA1Q6GYQ0 2036 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 TRBV23-1A0A0A0MS06 115 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 SHISA7A6NL88 538 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 RHPN2P1A8MT19 583 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 CLN5O75503 358 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 IGHV2-5P01817 119 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 DANCRP0C864 163 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 FCGR2AP12318 317 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 PRF1P14222 555 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 ADAM5Q6NVV9 412 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 LINC00469Q8N7U9 141 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 KLRF1Q9NZS2 232 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 PISDQ9UG56 409 aa13.25□□□□□ -0.29
PCDHGB1-202ENST00000611598 SDK1Q7Z5N4 2213 aa13.24□□□□□ -0.29
PCDHGB1-202ENST00000611598 SERPINE3A8MV23 424 aa13.24□□□□□ -0.29
PCDHGB1-202ENST00000611598 MYF5P13349 255 aa13.24□□□□□ -0.29
PCDHGB1-202ENST00000611598 GLP1RP43220 463 aa13.24□□□□□ -0.29
PCDHGB1-202ENST00000611598 HMGN3Q15651 99 aa13.24□□□□□ -0.29
PCDHGB1-202ENST00000611598 PLPPR5Q32ZL2 321 aa13.24□□□□□ -0.29
PCDHGB1-202ENST00000611598 TSPO2Q5TGU0 170 aa13.24□□□□□ -0.29
PCDHGB1-202ENST00000611598 EDARADDQ8WWZ3 215 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms