RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 MND1Q9BWT6 205 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 CHST5Q9GZS9 411 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 TLNRD1Q9H1K6 362 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 METTL17Q9H7H0 456 aaPredicted RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 PLEKHA1Q9HB21 404 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 PATZ1Q9HBE1 687 aaKnown RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 ABCB9Q9NP78 766 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 GPR173Q9NS66 373 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 CHCHD3Q9NX63 227 aaKnown RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 BABAM2Q9NXR7 383 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 DUX4Q9UBX2 424 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 ENPP5Q9UJA9 477 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 BLOC1S6Q9UL45 172 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 HHLA2Q9UM44 414 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 PPP1R3CQ9UQK1 317 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 NOP16Q9Y3C1 178 aaKnown RBP7.24□□□□□ -1.25
SNCA-212ENST00000611107 MPC1Q9Y5U8 109 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 ANK2Q01484 3957 aa7.24□□□□□ -1.25
SNCA-212ENST00000611107 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.23□□□□□ -1.25
SNCA-212ENST00000611107 TRBV2A0A0J9YWF9 115 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 PNMA8CA0A1B0GUJ8 204 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 ANKRD61A6NGH8 418 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 ANXA2P2A6NMY6 339 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 CEACAM18A8MTB9 384 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 RNF212BA8MTL3 300 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 TNFRSF13BO14836 293 aaPredicted RBP7.23□□□□□ -1.25
SNCA-212ENST00000611107 OGG1O15527 345 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 WNT2P09544 360 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 CD80P33681 288 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 MAP2K4P45985 399 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 TAS2R43P59537 309 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 BTG1P62324 171 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 KLF17Q5JT82 389 aaPredicted RBP7.23□□□□□ -1.25
SNCA-212ENST00000611107 CLVS2Q5SYC1 327 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 PLCXD3Q63HM9 321 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 FAHD2BQ6P2I3 314 aaPredicted RBP7.23□□□□□ -1.25
SNCA-212ENST00000611107 GLCCI1Q86VQ1 547 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 ZNF676Q8N7Q3 588 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 DEFB108BQ8NET1 73 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 OR1M1Q8NGA1 313 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 OR8S1Q8NH09 359 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 OR51F2Q8NH61 342 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 OR5AK2Q8NH90 309 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 PIGCQ92535 297 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 RAB1CQ92928 201 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 ITFG2Q969R8 447 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 DACT3Q96B18 629 aaPredicted RBP7.23□□□□□ -1.25
SNCA-212ENST00000611107 FAHD2AQ96GK7 314 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 TMEM246Q9BRR3 403 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 RTL8AQ9BWD3 113 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 COMMD4Q9H0A8 199 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 CTSZQ9UBR2 303 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 ERGIC3Q9Y282 383 aa7.23□□□□□ -1.25
SNCA-212ENST00000611107 IGKV1-9A0A0C4DH69 117 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 OR5B21A6NL26 309 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 A6NLC8 198 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.22□□□□□ -1.25
SNCA-212ENST00000611107 NRASP01111 189 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 AMY2BP19961 511 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 EEF1B2P24534 225 aaKnown RBP7.22□□□□□ -1.25
SNCA-212ENST00000611107 GPM6AP51674 278 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 RPS11P62280 158 aaKnown RBP eCLIP7.22□□□□□ -1.25
SNCA-212ENST00000611107 BDH1Q02338 343 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 SLC3A1Q07837 685 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 ACSM1Q08AH1 577 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 SPHARQ15513 63 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 UBE2V2Q15819 145 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 ZNF181Q2M3W8 571 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 CEACAM21Q3KPI0 293 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 KCTD21Q4G0X4 260 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 WDR82Q6UXN9 313 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 ZNF841Q6ZN19 808 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 MOB3CQ70IA8 216 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 BCL6BQ8N143 479 aaPredicted RBP7.22□□□□□ -1.25
SNCA-212ENST00000611107 SPERTQ8NA61 448 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 CCDC54Q8NEL0 328 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 OR13C3Q8NGS6 347 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 NPRL2Q8WTW4 380 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 TSEN15Q8WW01 171 aaKnown RBP7.22□□□□□ -1.25
SNCA-212ENST00000611107 C22orf15Q8WYQ4 148 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 TAF15Q92804 592 aaKnown RBP eCLIP7.22□□□□□ -1.25
SNCA-212ENST00000611107 C10orf35Q96D05 121 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 OPALINQ96PE5 141 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 MICU1Q9BPX6 476 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 CCDC90BQ9GZT6 254 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 ESM1Q9NQ30 184 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 C14orf119Q9NWQ9 140 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 LPAR3Q9UBY5 353 aa7.22□□□□□ -1.25
SNCA-212ENST00000611107 IGKV1-27A0A075B6S5 117 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 IGHV3OR15-7A0A075B7D8 119 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 IGHV3OR16-10A0A075B7F0 116 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 TRAV20A0A0B4J274 112 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 TRBV5-5A0A0J9YX44 114 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 PQLC2LA1A4F0 135 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 TMEM210A6NLX4 147 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 ZNF732B4DXR9 585 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 C22orf46C9J442 243 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 RHBDL1O75783 438 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 GRPP07492 148 aa7.21□□□□□ -1.26
SNCA-212ENST00000611107 ZNF12P17014 697 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms