RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 AKR7A2O43488 359 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 IFI6P09912 130 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 CTXN2P0C2S0 81 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 HIST1H1DP16402 221 aaKnown RBP6.42□□□□□ -1.38
CSDE1-218ENST00000610726 F2RL1P55085 397 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 MS4A18Q3C1V0 323 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 RFESDQ8TAC1 157 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 RTN4IP1Q8WWV3 396 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-218ENST00000610726 SLC39A7Q92504 469 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF285Q96NJ3 590 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 SLC7A10Q9NS82 523 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 ST6GALNAC2Q9UJ37 374 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 PRELID3BQ9Y3B1 194 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 PCNX2A6NKB5 2137 aa6.42□□□□□ -1.38
CSDE1-218ENST00000610726 IFNA10P01566 189 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 C1QBP02746 253 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 PPP3CBP16298 524 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 PIGPP57054 158 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 SRPXP78539 464 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 MRPS34P82930 218 aaKnown RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 RAB31Q13636 194 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 SSX9Q7RTT3 188 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 PBDC1Q9BVG4 233 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 PRMT8Q9NR22 394 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM38BQ9NVV0 291 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 LSM2Q9Y333 95 aaKnown RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 NUPL2O15504 423 aaKnown RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM127O75204 238 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 AGFG2O95081 481 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TRAPPC2P0DI81 140 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TRAPPC2BP0DI82 140 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 RAB6AP20340 208 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 NME2P22392 152 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 ACP1P24666 158 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 ECI1P42126 302 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 SP6Q3SY56 376 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 FBLIM1Q8WUP2 373 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 YIPF5Q969M3 257 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 ADAT3Q96EY9 351 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TMPRSS13Q9BYE2 586 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 OR2H1Q9GZK4 316 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 KIF25Q9UIL4 384 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF391Q9UJN7 358 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 MED13LQ71F56 2210 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 NPIPB9F8W1W9 429 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 CDC14BO60729 498 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 MED6O75586 246 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 RGS11O94810 467 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF17P17021 662 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 GSK3AP49840 483 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 PPP1CBP62140 327 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 ZP4Q12836 540 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF169Q14929 603 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 ST8SIA4Q92187 359 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 BOD1Q96IK1 185 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 GPX7Q96SL4 187 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 SUCNR1Q9BXA5 334 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 PLK3Q9H4B4 646 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 PLEKHA3Q9HB20 300 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 HEYLQ9NQ87 328 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 PTPRDP23468 1912 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 A0A1B0GUH1 482 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 OR5H14A6NHG9 310 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TERTO14746 1132 aaKnown RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 SOCS1O15524 211 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 DNPH1O43598 174 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TXNDC12O95881 172 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 PNPP00491 289 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 IFNA1P01562 189 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 GIPP09681 153 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TBPP20226 339 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 MPGP29372 298 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 KIR3DL2P43630 455 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TSC22D1Q15714 1073 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 SMIM21Q3B7S5 101 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM268Q5VZI3 342 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 OR8U1Q8NH10 309 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 OR4A16Q8NH70 328 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 PARP12Q9H0J9 701 aaKnown RBP6.41□□□□□ -1.38
CSDE1-218ENST00000610726 OPA3Q9H6K4 179 aa6.41□□□□□ -1.38
CSDE1-218ENST00000610726 TOR1AO14656 332 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 ST8SIA3O43173 380 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 GMDSO60547 372 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 TTRP02766 147 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 CST2P09228 141 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 RFPL3SP0C7P2 107 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 GABRA1P14867 456 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 NKX2-1P43699 371 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-218ENST00000610726 CD300CQ08708 224 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 FBXW9Q5XUX1 488 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 FAM58AQ8N1B3 248 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM229BQ8NBD8 167 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 OR10AD1Q8NGE0 317 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 OR13G1Q8NGZ3 307 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 OR6S1Q8NH40 331 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 C22orf15Q8WYQ4 148 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 CMTM3Q96MX0 182 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 KCNK17Q96T54 332 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 NEURL2Q9BR09 285 aa6.4□□□□□ -1.38
CSDE1-218ENST00000610726 ESRP2Q9H6T0 727 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms