RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 UBALD1Q8TB05 177 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 ZNF391Q9UJN7 358 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 TSTD3H0UI37 97 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 GPR31O00270 319 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 CNIH1O95406 144 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 ZIC2O95409 532 aaPredicted RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 GABRA4P48169 554 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 RP1P56715 2156 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 B3GNTL1Q67FW5 361 aaPredicted RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 RPUSD3Q6P087 351 aaKnown RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 PATZ1Q9HBE1 687 aaKnown RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 GAB2Q9UQC2 676 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 LIPT2A6NK58 231 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 MGST1P10620 155 aaKnown RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 NDUFA6P56556 154 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 PRSS12P56730 875 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 RNPS1Q15287 305 aaKnown RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 ALKBH6Q3KRA9 238 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 C15orf54Q8N8G6 183 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 OR2Y1Q8NGV0 311 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 S1PR3Q99500 378 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 FAAP24Q9BTP7 215 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 PSENENQ9NZ42 101 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 RCL1Q9Y2P8 373 aaKnown RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 R4GN57 208 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 ZNFX1Q9P2E3 1918 aaKnown RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 GREB1LQ9C091 1923 aaPredicted RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 TCRBV16S1A1N1A0A5B0 115 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 AQP7O14520 342 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 SCO1O75880 301 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 RAB4AP20338 218 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 TMEM41BQ5BJD5 291 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 CXorf67Q86X51 503 aaPredicted RBP12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 LHX4Q969G2 390 aa12.68□□□□□ -0.38
PCDHB16-201ENST00000609684 ANKRD20A5PA0PJZ0 165 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 ABCD4O14678 606 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 CDC14BO60729 498 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 AQP8O94778 261 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 SEMG1P04279 462 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 GP1BAP07359 652 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 SLC6A1P30531 599 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 PRSS42Q7Z5A4 293 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 DUSP18Q8NEJ0 188 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 OR5AP2Q8NGF4 316 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 OR8B12Q8NGG6 310 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 OR10X1Q8NGY0 326 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 HGDQ93099 445 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 GALMQ96C23 342 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 ADAT1Q9BUB4 502 aaKnown RBP12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 ZNF768Q9H5H4 540 aaKnown RBP12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 TUBAL3A6NHL2 446 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 CSRP3P50461 194 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 AANATQ16613 207 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 C1orf87Q8N0U7 546 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 EDARADDQ8WWZ3 215 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 TIMD4Q96H15 378 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 BTF3L4Q96K17 158 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 SLC35E1Q96K37 410 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 ATP6V1G2-DDX39BF2Z307 99 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 S100A7P31151 101 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 GVQW1Q8N7I0 195 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 ZNF485Q8NCK3 441 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 UCK1Q9HA47 277 aa12.67□□□□□ -0.38
PCDHB16-201ENST00000609684 ERGP11308 486 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 GSK3AP49840 483 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 OR2A2Q6IF42 318 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 OR8U1Q8NH10 309 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 SARGQ9BW04 601 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 HIF1ANQ9NWT6 349 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 A0A1B0GTQ1 180 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 AQP7P3A6NL99 342 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 CST7O76096 145 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 CCL2P13500 99 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 CA6P23280 308 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 SUB1P53999 127 aaKnown RBP eCLIP12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 PRDX4Q13162 271 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 ISXQ2M1V0 245 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 NHLRC1Q6VVB1 395 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 DGAT2L6Q6ZPD8 337 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 C9orf40Q8IXQ3 194 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 OR10AC1Q8NH08 325 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 IER2Q9BTL4 223 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 TPRP12270 2363 aaKnown RBP12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 UNC13CQ8NB66 2214 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 OR4C45A6NMZ5 311 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 RAC3P60763 192 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 Q7L0L9 218 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 TMPRSS13Q9BYE2 586 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 OR2C1O95371 312 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 ACAA2P42765 397 aaKnown RBP12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 LIMK1P53667 647 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 DMWDQ09019 674 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 ZNF816Q0VGE8 651 aaPredicted RBP12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 KIAA0141Q14154 515 aaPredicted RBP12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 RTL8BQ17RB0 113 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 MRGPREQ86SM8 312 aa12.66□□□□□ -0.38
PCDHB16-201ENST00000609684 TRGV8A0A0C4DH27 118 aa12.65□□□□□ -0.38
PCDHB16-201ENST00000609684 SCGB1D1O95968 90 aa12.65□□□□□ -0.38
PCDHB16-201ENST00000609684 SPINK14Q6IE38 97 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms