RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SYNGR1O43759 233 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 SSX4O60224 188 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 PTBP3O95758 552 aaKnown RBP6.49□□□□□ -1.37
MSH6-211ENST00000606499 F12P00748 615 aaPredicted RBP6.49□□□□□ -1.37
MSH6-211ENST00000606499 DAOP14920 347 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 SRMP19623 302 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 PRKACBP22694 351 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 MYL9P24844 172 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 BDKRB2P30411 391 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 HAAOP46952 286 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 RBP2P50120 134 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 FUT6P51993 359 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 EFNA4P52798 201 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 ATP5J2P56134 94 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 MTCP1P56278 107 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 NCS1P62166 190 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 GNG3P63215 75 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 BLMHQ13867 455 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 KISS1Q15726 138 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 DEFB113Q30KQ7 82 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 TIMM50Q3ZCQ8 353 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 DDI2Q5TDH0 399 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 HAGHLQ6PII5 290 aaPredicted RBP6.49□□□□□ -1.37
MSH6-211ENST00000606499 ZNF826PQ6ZT77 177 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 LRRTM1Q86UE6 522 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 CLVS1Q8IUQ0 354 aaPredicted RBP6.49□□□□□ -1.37
MSH6-211ENST00000606499 BATF2Q8N1L9 274 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 ZNF525Q8N782 197 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 CELF2-AS1Q8N7Q2 184 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 SPERTQ8NA61 448 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 SCCPDHQ8NBX0 429 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 PHYHIPQ92561 330 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 YIPF5Q969M3 257 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 BORCS8Q96FH0 119 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 GFI1Q99684 422 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 OR51I2Q9H344 312 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 TCF7L1Q9HCS4 588 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 GCM1Q9NP62 436 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 TMEM138Q9NPI0 162 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 C1orf123Q9NWV4 160 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 FOXJ3Q9UPW0 622 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 PPP1R3CQ9UQK1 317 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 DYSFO75923 2080 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 AKAP6Q13023 2319 aa6.49□□□□□ -1.37
MSH6-211ENST00000606499 hCG_1807616A0A1W2PRN6 198 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 J3QT63 122 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 CDIPTO14735 213 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 MAGEB3O15480 346 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 SPRY1O43609 319 aaPredicted RBP6.48□□□□□ -1.37
MSH6-211ENST00000606499 ANGPTL7O43827 346 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 RP2O75695 350 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 RHBDL1O75783 438 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 ALX3O95076 343 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 GABARAPO95166 117 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 CYB5R3P00387 301 aaPredicted RBP6.48□□□□□ -1.37
MSH6-211ENST00000606499 CLEC2LP0C7M8 214 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 PAX1P15863 534 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 TNFRSF1AP19438 455 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 COL8A2P25067 703 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 PMELP40967 661 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 GATA4P43694 442 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 OR3A4PP47883 348 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 POU3F4P49335 361 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 ATP1B3P54709 279 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 OR10A3P58181 314 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 GMFBP60983 142 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 VBP1P61758 197 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 MXD1Q05195 221 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 MZT1Q08AG7 82 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 CARTPTQ16568 116 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 CTF1Q16619 201 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 FAM76BQ5HYJ3 339 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 WDR82Q6UXN9 313 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 LHFPL2Q6ZUX7 228 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 SLC25A26Q70HW3 274 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 NR2C2APQ86WQ0 139 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 LYPD6Q86Y78 171 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 ZNF573Q86YE8 665 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 ANKRD13BQ86YJ7 626 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 C11orf53Q8IXP5 236 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 JAGN1Q8N5M9 183 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 NEU4Q8WWR8 484 aaPredicted RBP6.48□□□□□ -1.37
MSH6-211ENST00000606499 AQP3Q92482 292 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 CCL17Q92583 94 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 SLAMF9Q96A28 289 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 MBD6Q96DN6 1003 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 ZNF488Q96MN9 340 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 KCTD7Q96MP8 289 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 GPER1Q99527 375 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 GSX2Q9BZM3 304 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 FAM192AQ9GZU8 254 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 SLITRK2Q9H156 845 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 TLNRD1Q9H1K6 362 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 METTL17Q9H7H0 456 aaPredicted RBP6.48□□□□□ -1.37
MSH6-211ENST00000606499 FN3KRPQ9HA64 309 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 NEK6Q9HC98 313 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 SNTG1Q9NSN8 517 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 BEX4Q9NWD9 120 aaPredicted RBP6.48□□□□□ -1.37
MSH6-211ENST00000606499 GSTK1Q9Y2Q3 226 aa6.48□□□□□ -1.37
MSH6-211ENST00000606499 AK6Q9Y3D8 172 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms