RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 OR10A2Q9H208 303 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 ADAM10O14672 748 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 CD37P11049 281 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 MMP16P51512 607 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 NHLH2Q02577 135 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 RPUSD3Q6P087 351 aaKnown RBP16.15■□□□□ 0.18
UPF1-210ENST00000600689 ZNF529Q6P280 563 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 Q7L0L9 218 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 CPEB2Q7Z5Q1 589 aaKnown RBP16.15■□□□□ 0.18
UPF1-210ENST00000600689 SULF2Q8IWU5 870 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 TSTD1Q8NFU3 115 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 OR8B12Q8NGG6 310 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 ASB10Q8WXI3 467 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 DYRK2Q92630 601 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 OCSTAMPQ9BR26 566 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 SEBOXQ9HB31 216 aaPredicted RBP16.15■□□□□ 0.18
UPF1-210ENST00000600689 UNC13CQ8NB66 2214 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 FRG2CA6NGY1 282 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 NXPH3O95157 252 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 DDAH2O95865 285 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 IGHV2-70P01814 119 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 FOLR2P14207 255 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 OR2AJ1Q8NGZ0 328 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 ZNF721Q8TF20 911 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 LMAN1LQ9HAT1 526 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 WFDC1Q9HC57 220 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 ZNF581Q9P0T4 197 aa16.15■□□□□ 0.18
UPF1-210ENST00000600689 METTL1Q9UBP6 276 aaKnown RBP16.15■□□□□ 0.18
UPF1-210ENST00000600689 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 IGHV1OR15-9A0A0B4J2B8 117 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 TNFSF12O43508 249 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 OR2C1O95371 312 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 CHRM2P08172 466 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 FBP1P09467 338 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 SNCAP37840 140 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 DEFB133Q30KQ1 61 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 RNF212Q495C1 297 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 GRINAQ7Z429 371 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 SUMF1Q8NBK3 374 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 PIGQQ9BRB3 760 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 FAM212BQ9NTI7 297 aaPredicted RBP16.14■□□□□ 0.17
UPF1-210ENST00000600689 SUSD2Q9UGT4 822 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 DHRS7CA6NNS2 312 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 CDRT15L2A8MXV6 281 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 F5H5K5 113 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 JTBO76095 146 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 IFNA21P01568 189 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 HPNP05981 417 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 GUSBP08236 651 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 RPS2P15880 293 aaKnown RBP16.14■□□□□ 0.17
UPF1-210ENST00000600689 MPZP25189 248 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 BLKP51451 505 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 PDCD1Q15116 288 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 ZNF674Q2M3X9 581 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 TDHQ8IZJ6 230 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 ABHD14AQ9BUJ0 271 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 TOLLIPQ9H0E2 274 aa16.14■□□□□ 0.17
UPF1-210ENST00000600689 NXT1Q9UKK6 140 aaKnown RBP16.14■□□□□ 0.17
UPF1-210ENST00000600689 RAMP1O60894 148 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 KLK2P20151 261 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 TBPP20226 339 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 C14orf28Q4W4Y0 310 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 VAX1Q5SQQ9 334 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 SYT13Q7L8C5 426 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 URM1Q9BTM9 101 aaKnown RBP16.13■□□□□ 0.17
UPF1-210ENST00000600689 LANCL2Q9NS86 450 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 DNAJB11Q9UBS4 358 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 A0A1W2PNR3 127 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 RNF224P0DH78 156 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 TMEM225BP0DP42 221 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 TSC22D1Q15714 1073 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 OGFOD3Q6PK18 319 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 P4HA3Q7Z4N8 544 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 SGPP2Q8IWX5 399 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 ZNF383Q8NA42 475 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 OR56B1Q8NGI3 324 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 C1orf123Q9NWV4 160 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 SRPK3Q9UPE1 567 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 OSGIN2Q9Y236 505 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 TMEM131Q92545 1883 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 ALG1L2C9J202 215 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 E9PLN8 166 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 NPIPB7O75200 414 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 GSTP1P09211 210 aaKnown RBP16.13■□□□□ 0.17
UPF1-210ENST00000600689 CAPZBP47756 277 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 GABRA4P48169 554 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 HAGHQ16775 308 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 PCK2Q16822 640 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 TMEM156Q8N614 296 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 S100PBPQ96BU1 408 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 C1orf147Q96MC9 270 aaPredicted RBP16.13■□□□□ 0.17
UPF1-210ENST00000600689 SCGB3A2Q96PL1 93 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 S100A13Q99584 98 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 C19orf12Q9NSK7 152 aa16.13■□□□□ 0.17
UPF1-210ENST00000600689 CLRN1P58418 232 aa16.12■□□□□ 0.17
UPF1-210ENST00000600689 H1FNTQ75WM6 255 aaPredicted RBP16.12■□□□□ 0.17
UPF1-210ENST00000600689 LYZL2Q7Z4W2 148 aa16.12■□□□□ 0.17
UPF1-210ENST00000600689 OR5L1Q8NGL2 311 aa16.12■□□□□ 0.17
UPF1-210ENST00000600689 KCNK17Q96T54 332 aa16.12■□□□□ 0.17
UPF1-210ENST00000600689 EGLN1Q9GZT9 426 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms