RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 C3orf80F5H4A9 247 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 CDIPTO14735 213 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 PPP3R1P63098 170 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 HSD17B12Q53GQ0 312 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 Q5PR19 223 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 HAGHLQ6PII5 290 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 DNM1P46Q6ZS02 220 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 ANGPTL5Q86XS5 388 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 CALHM1Q8IU99 346 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 OR52N4Q8NGI2 321 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 Q8TCH9 128 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 CCL17Q92583 94 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 RFT1Q96AA3 541 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 METTL17Q9H7H0 456 aaPredicted RBP16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 FN3KRPQ9HA64 309 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 TMEM106BQ9NUM4 274 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 FOXJ3Q9UPW0 622 aa16.87■□□□□ 0.29
SHKBP1-222ENST00000600320 SHISA3A0PJX4 238 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 RHBDL1O75783 438 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 CYB5R3P00387 301 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 HCKP08631 526 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 OCMP0CE72 109 aaPredicted RBP16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 HAAOP46952 286 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 ART1P52961 327 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 C22orf42Q6IC83 251 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 WDR82Q6UXN9 313 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 LHFPL2Q6ZUX7 228 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 LRRTM1Q86UE6 522 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 AQP3Q92482 292 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 ERGIC1Q969X5 290 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 EXOSC4Q9NPD3 245 aaKnown RBP16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 DLL4Q9NR61 685 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 ITGB1BP2Q9UKP3 347 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 PDZD2O15018 2839 aa16.86■□□□□ 0.29
SHKBP1-222ENST00000600320 SYNGR1O43759 233 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 MAS1P04201 325 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 EGR1P18146 543 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 ADRA2CP18825 462 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 GALP22466 123 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 BDKRB2P30411 391 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 RBP2P50120 134 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 PDLIM4P50479 330 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 ATP1B3P54709 279 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 MTCP1P56278 107 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 CLEC12BQ2HXU8 276 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 ZNF181Q2M3W8 571 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 HFEQ30201 348 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 FAM201AQ5SY85 155 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 ZNF573Q86YE8 665 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 PHYHIPQ92561 330 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 CHCHD6Q9BRQ6 235 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 RNF167Q9H6Y7 350 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 CHODLQ9H9P2 273 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 MYOZ1Q9NP98 299 aaPredicted RBP16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 TMEM138Q9NPI0 162 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 TXNL4BQ9NX01 149 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 CKLFQ9UBR5 152 aa16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 ANKRD17O75179 2603 aaKnown RBP16.85■□□□□ 0.29
SHKBP1-222ENST00000600320 hCG_1807616A0A1W2PRN6 198 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 TRIM64BA6NI03 449 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 TMEM178BH3BS89 294 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 J3QT63 122 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 PLATP00750 562 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 ALDOBP05062 364 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 SRMP19623 302 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 CALRP27797 417 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 RIN1Q13671 783 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 DDI2Q5TDH0 399 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 GCSAMQ8N6F7 178 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 OR5D18Q8NGL1 313 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 OR11L1Q8NGX0 322 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 C10orf105Q8TEF2 133 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 LRRC29Q8WV35 223 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 TCF7L1Q9HCS4 588 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 SCOCQ9UIL1 159 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 SSR3Q9UNL2 185 aa16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 PRRC2AP48634 2157 aaKnown RBP16.84■□□□□ 0.29
SHKBP1-222ENST00000600320 IGHV4-30-2A0A087WSY4 118 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 LOC100506127A0A0U1RQW1 187 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 ARL6IP5O75915 188 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 ZNF205O95201 554 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 MPZP25189 248 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 FGF9P31371 208 aaPredicted RBP16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 POU3F4P49335 361 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 ZP1P60852 638 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 KISS1Q15726 138 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 CLEC2AQ6UVW9 174 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 PRSS57Q6UWY2 283 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 SATL1Q86VE3 508 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 LYPD6Q86Y78 171 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 BOLLQ8N9W6 283 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 C19orf18Q8NEA5 215 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 FAM168AQ92567 244 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 ZNF488Q96MN9 340 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 GFI1Q99684 422 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 CENPOQ9BU64 300 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 FUNDC2Q9BWH2 189 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 PKIBQ9C010 78 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 NEK6Q9HC98 313 aa16.83■□□□□ 0.28
SHKBP1-222ENST00000600320 RNF7Q9UBF6 113 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms