RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 MOB1AQ9H8S9 216 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 SHPKQ9UHJ6 478 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 A0A087WZY1 265 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 NPIPB13A6NJU9 1138 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 TTLL8A6PVC2 850 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 NPIPB4C9JG80 1138 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 ZNF735P0CB33 412 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 CD79AP11912 226 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 ACKR3P25106 362 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 TGIF1Q15583 401 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR56B1Q8NGI3 324 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 SGCZQ96LD1 299 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 SIGLEC12Q96PQ1 595 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 HRH4Q9H3N8 390 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 C12orf49Q9H741 205 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 IL17BQ9UHF5 180 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 NPTNQ9Y639 398 aa10.1□□□□□ -0.79
ARHGEF1-220ENST00000600274 C3orf80F5H4A9 247 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 SULT1C2O00338 296 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 TMEM127O75204 238 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 VAMP5O95183 116 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 GLRA1P23415 457 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 CASRP41180 1078 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 CTAG1AP78358 180 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 TRA2AQ13595 282 aaKnown RBP eCLIP10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 CBLN2Q8IUK8 224 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 BPIFCQ8NFQ6 507 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 SLCO5A1Q9H2Y9 848 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 CHMP1AQ9HD42 196 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 FLVCR1Q9Y5Y0 555 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 GJE1A6NN92 205 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 DHRS3O75911 302 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 HLA-HP01893 362 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 SERPINF1P36955 418 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 CEBPGP53567 150 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 NHLRC3Q5JS37 347 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 MOB3CQ70IA8 216 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 NAXDQ8IW45 347 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 SEMA6DQ8NFY4 1073 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 OR2V1Q8NHB1 315 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 FNDC9Q8TBE3 224 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 SGK3Q96BR1 496 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 BORCS8Q96FH0 119 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 FOXB1Q99853 325 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 FAAP24Q9BTP7 215 aa10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 NOSIPQ9Y314 301 aaKnown RBP10.09□□□□□ -0.79
ARHGEF1-220ENST00000600274 C9orf170A2RU37 121 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 TMEM14DPA8MWL7 114 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 MRPL33O75394 65 aaKnown RBP10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 SCGB1D2O95969 90 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 CD63P08962 238 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 MAGEA5P43359 124 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 RAC3P60763 192 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 H3F3AP84243 136 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 RBM39Q14498 530 aaKnown RBP10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 BVESQ8NE79 360 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 NANPQ8TBE9 248 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 DCUN1D4Q92564 292 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 MBD2Q9UBB5 411 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 ROS1P08922 2347 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 LOC390937A0A1W2PQ73 354 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 ZNF850A8MQ14 1090 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR2A4O95047 310 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 RAB6AP20340 208 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 FOXG1P55316 489 aaPredicted RBP10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 HGFACQ04756 655 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 SCRN3Q0VDG4 424 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 LY6G6FQ5SQ64 297 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 PLCXD3Q63HM9 321 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 RGS7BPQ6MZT1 257 aaPredicted RBP10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 LYG2Q86SG7 212 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 TMEM123Q8N131 208 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 DTWD2Q8NBA8 298 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 NEK7Q8TDX7 302 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 OR2A7Q96R45 310 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 DMRTA2Q96SC8 542 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 KIF25Q9UIL4 384 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 MPTX1A8MV57 137 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 ETV2O00321 342 aaPredicted RBP10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 SRD5A2P31213 254 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 ECH1Q13011 328 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 TSPO2Q5TGU0 170 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 TMPRSS7Q7RTY8 843 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 CDH26Q8IXH8 852 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 NABP1Q96AH0 204 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 NKX6-2Q9C056 277 aaPredicted RBP10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 DEFB127Q9H1M4 99 aa10.08□□□□□ -0.8
ARHGEF1-220ENST00000600274 TEX13DA0A0J9YY54 714 aaPredicted RBP10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 MFSD2BA6NFX1 497 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 C9orf172C9J069 976 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 SLC33A1O00400 549 aaPredicted RBP10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 S100A6P06703 90 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 CHRM2P08172 466 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 TDGF1P13385 188 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 DUSP1P28562 367 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 LSM6P62312 80 aaKnown RBP10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 AIMP2Q13155 320 aaKnown RBP10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 RSPO1Q2MKA7 263 aaPredicted RBP10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 PIGYQ3MUY2 71 aa10.07□□□□□ -0.8
ARHGEF1-220ENST00000600274 ADPRHL1Q8NDY3 354 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms