RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 GPM6AP51674 278 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 ZNF154Q13106 437 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 ACSM3Q53FZ2 586 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 FAM76BQ5HYJ3 339 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 TMEM91Q6ZNR0 172 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 MOGAT3Q86VF5 341 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 SERPINA12Q8IW75 414 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 C11orf53Q8IXP5 236 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 OR1M1Q8NGA1 313 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 OR13C9Q8NGT0 318 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 TMEM203Q969S6 136 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 TECTBQ96PL2 329 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 TLNRD1Q9H1K6 362 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 MYOZ1Q9NP98 299 aaPredicted RBP15.89■□□□□ 0.13
CCDC9-205ENST00000600117 NDUFB11Q9NX14 153 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 DCAF16Q9NXF7 216 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 TAS2R4Q9NYW5 299 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 DYSFO75923 2080 aa15.89■□□□□ 0.13
CCDC9-205ENST00000600117 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.88■□□□□ 0.131e-13■■■■■ 50.6
CCDC9-205ENST00000600117 TMEM210A6NLX4 147 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 ZNF732B4DXR9 585 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 CCRL2O00421 344 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 ALX3O95076 343 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 SERPINA3P01011 423 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 GRPP07492 148 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 IGFBP3P17936 291 aaPredicted RBP15.88■□□□□ 0.13
CCDC9-205ENST00000600117 GNG3P63215 75 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 CNN3Q15417 329 aaKnown RBP15.88■□□□□ 0.13
CCDC9-205ENST00000600117 TRAM1Q15629 374 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 OR5D14Q8NGL3 314 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 ZNF420Q8TAQ5 688 aaPredicted RBP15.88■□□□□ 0.13
CCDC9-205ENST00000600117 Q8TCH9 128 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 NPRL2Q8WTW4 380 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 ERGIC1Q969X5 290 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 OR51I2Q9H344 312 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 UFSP2Q9NUQ7 469 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 TREM2Q9NZC2 230 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 PPP1R3CQ9UQK1 317 aa15.88■□□□□ 0.13
CCDC9-205ENST00000600117 IGKV1-27A0A075B6S5 117 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 TRAV8-7A0A075B6U6 113 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 A0A1W2PPK0 400 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 LRP5LA4QPB2 252 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 MAGEA13PA6NCF6 341 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 GPX5O75715 221 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 FSTP19883 344 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 AZGP1P25311 298 aaKnown RBP15.87■□□□□ 0.13
CCDC9-205ENST00000600117 PSMA1P25786 263 aaKnown RBP15.87■□□□□ 0.13
CCDC9-205ENST00000600117 PDLIM4P50479 330 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 FABP5Q01469 135 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 FAM27D1Q5T7N8 215 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 DNAAF1Q8NEP3 725 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 OR51A2Q8NGJ7 313 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 TRMT10AQ8TBZ6 339 aaKnown RBP15.87■□□□□ 0.13
CCDC9-205ENST00000600117 THRSPQ92748 146 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 CHODLQ9H9P2 273 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 NOX4Q9NPH5 578 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 SLC7A11Q9UPY5 501 aa15.87■□□□□ 0.13
CCDC9-205ENST00000600117 SULT1B1O43704 296 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 RGS9O75916 674 aaPredicted RBP15.86■□□□□ 0.13
CCDC9-205ENST00000600117 CSF3P09919 207 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 GIFP27352 417 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 MAPK3P27361 379 aaPredicted RBP15.86■□□□□ 0.13
CCDC9-205ENST00000600117 TGFBR2P37173 567 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 FUT6P51993 359 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 RIN1Q13671 783 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 CLEC12BQ2HXU8 276 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 ZNF181Q2M3W8 571 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 HFEQ30201 348 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 CRIP3Q6Q6R5 217 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 CD200R1LQ6Q8B3 271 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 ZNF826PQ6ZT77 177 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 RNF144BQ7Z419 303 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 C10orf105Q8TEF2 133 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 CCL17Q92583 94 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 RPL3LQ92901 407 aaKnown RBP15.86■□□□□ 0.13
CCDC9-205ENST00000600117 SPSB1Q96BD6 273 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 MRPS26Q9BYN8 205 aaKnown RBP15.86■□□□□ 0.13
CCDC9-205ENST00000600117 PPIL3Q9H2H8 161 aaKnown RBP15.86■□□□□ 0.13
CCDC9-205ENST00000600117 FN3KRPQ9HA64 309 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 VCX3AQ9NNX9 186 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 TMEM106BQ9NUM4 274 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 C1orf123Q9NWV4 160 aa15.86■□□□□ 0.13
CCDC9-205ENST00000600117 FAM230AA0A1W2PPH8 454 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 A6NLC8 198 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 GABRPO00591 440 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 UCHL1P09936 223 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 PRKACBP22694 351 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 CARTPTQ16568 116 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 CLEC2AQ6UVW9 174 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 CEACAM19Q7Z692 300 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 SCCPDHQ8NBX0 429 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 FAM168AQ92567 244 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 BORCS8Q96FH0 119 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 CR1P17927 2039 aa15.85■□□□□ 0.13
CCDC9-205ENST00000600117 IGHV4-30-2A0A087WSY4 118 aa15.84■□□□□ 0.13
CCDC9-205ENST00000600117 TRDV1A0A1B0GX56 115 aa15.84■□□□□ 0.13
CCDC9-205ENST00000600117 VWC2LB2RUY7 222 aa15.84■□□□□ 0.13
CCDC9-205ENST00000600117 TMEM178BH3BS89 294 aa15.84■□□□□ 0.13
CCDC9-205ENST00000600117 IFNL4K9M1U5 179 aa15.84■□□□□ 0.13
CCDC9-205ENST00000600117 CDIPTO14735 213 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms