RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 OPA3Q9H6K4 179 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 DNAJC27Q9NZQ0 273 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 LAMP5Q9UJQ1 280 aa12.57□□□□□ -0.4
LIG1-214ENST00000597146 PRODHO43272 600 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 GMDSO60547 372 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 GRPP07492 148 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 LYNP07948 512 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 CFL1P23528 166 aaKnown RBP12.56□□□□□ -0.4
LIG1-214ENST00000597146 DDOSTP39656 456 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 NAA10P41227 235 aaPredicted RBP12.56□□□□□ -0.4
LIG1-214ENST00000597146 DAPP51397 102 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 ESRRGP62508 458 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 EGFEM1PQ0D2K5 195 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 APOFQ13790 326 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 ATP6AP1Q15904 470 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 PCK2Q16822 640 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 SLC35D3Q5M8T2 416 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 CASC10Q5T4H9 136 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 LINC01590Q5TEZ4 76 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 LCN1P1Q5VSP4 162 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 ZNF826PQ6ZT77 177 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 KRT77Q7Z794 578 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 C10orf67Q8IYJ2 551 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 CMTM4Q8IZR5 234 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 OR51G2Q8NGK0 314 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 OR8S1Q8NH09 359 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 OR5M11Q96RB7 305 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 C14orf119Q9NWQ9 140 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 ENOPH1Q9UHY7 261 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
LIG1-214ENST00000597146 CSMD3Q7Z407 3707 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 A6NLC8 198 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 NDUFA2O43678 99 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 SELENOFO60613 162 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 PF4V1P10720 104 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 GNALP38405 381 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 BMXP51813 675 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 PTGES3Q15185 160 aaKnown RBP12.55□□□□□ -0.4
LIG1-214ENST00000597146 LRRC75BQ2VPJ9 315 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 KCTD18Q6PI47 426 aaPredicted RBP12.55□□□□□ -0.4
LIG1-214ENST00000597146 RNF144BQ7Z419 303 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 GCSAMQ8N6F7 178 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 OR52H1Q8NGJ2 320 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 UTP4Q969X6 686 aaKnown RBP12.55□□□□□ -0.4
LIG1-214ENST00000597146 ADAT1Q9BUB4 502 aaKnown RBP12.55□□□□□ -0.4
LIG1-214ENST00000597146 SLC25A19Q9HC21 320 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 RAB18Q9NP72 206 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 TRIM36Q9NQ86 728 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 C1orf123Q9NWV4 160 aa12.55□□□□□ -0.4
LIG1-214ENST00000597146 PF4P02776 101 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 ZNF121P58317 390 aaPredicted RBP12.54□□□□□ -0.4
LIG1-214ENST00000597146 SNCBQ16143 134 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 C11orf91Q3C1V1 193 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 KLHL22Q53GT1 634 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 DMRTC1Q5HYR2 192 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 FAHD1Q6P587 224 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 TIGD4Q8IY51 512 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 FAM216BQ8N7L0 139 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 OTOSQ8NHW6 89 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 RNF133Q8WVZ7 376 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 SGK3Q96BR1 496 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 REEP6Q96HR9 211 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 RCC1LQ96I51 464 aaKnown RBP12.54□□□□□ -0.4
LIG1-214ENST00000597146 AJUBAQ96IF1 538 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 TEAD3Q99594 435 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 CCL13Q99616 98 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 MRPL15Q9P015 296 aaKnown RBP12.54□□□□□ -0.4
LIG1-214ENST00000597146 KAAG1Q9UBP8 84 aa12.54□□□□□ -0.4
LIG1-214ENST00000597146 LCE6AA0A183 80 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 hCG_1807616A0A1W2PRN6 198 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 PSKH1P11801 424 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 OTX1P32242 354 aaPredicted RBP12.53□□□□□ -0.4
LIG1-214ENST00000597146 UBE2E1P51965 193 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 HCCSP53701 268 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 ACTR3P61158 418 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 SLC16A9Q7RTY1 509 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 FTMTQ8N4E7 242 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 OR56B2PQ8NGI1 322 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 HIST1H2AAQ96QV6 131 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 DCTN5Q9BTE1 182 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 YIPF3Q9GZM5 350 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 FAM234AQ9H0X4 552 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 NIPAL2Q9H841 368 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 ORC6Q9Y5N6 252 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 TMEM14AQ9Y6G1 99 aa12.53□□□□□ -0.4
LIG1-214ENST00000597146 EBAG9O00559 213 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 MITFO75030 526 aaPredicted RBP12.52□□□□□ -0.41
LIG1-214ENST00000597146 PTBP3O95758 552 aaKnown RBP12.52□□□□□ -0.41
LIG1-214ENST00000597146 MRPL3P09001 348 aaKnown RBP12.52□□□□□ -0.41
LIG1-214ENST00000597146 ATP6V1E1P36543 226 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 OPRL1P41146 370 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 ACSM1Q08AH1 577 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 IKZF1Q13422 519 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 TMEM95Q3KNT9 176 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 WDR38Q5JTN6 314 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 TEX36Q5VZQ5 186 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 HCP5Q6MZN7 132 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 COMMD2Q86X83 199 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 Q8N2B8 174 aa12.52□□□□□ -0.41
LIG1-214ENST00000597146 TCEANCQ8N8B7 351 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms