RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 BBS1Q8NFJ9 593 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 OR5A2Q8NGI9 324 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 ZNF671Q8TAW3 534 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 C17orf50Q8WW18 174 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 AJUBAQ96IF1 538 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 FAM234AQ9H0X4 552 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 FAM206AQ9NX38 181 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 LAMP5Q9UJQ1 280 aa19.5■□□□□ 0.71
LSM4-202ENST00000593564 OR5B21A6NL26 309 aa19.49■□□□□ 0.71
LSM4-202ENST00000593564 ATP6V1B1P15313 513 aa19.49■□□□□ 0.71
LSM4-202ENST00000593564 RPS7P62081 194 aaKnown RBP19.49■□□□□ 0.71
LSM4-202ENST00000593564 HERPUD1Q15011 391 aa19.49■□□□□ 0.71
LSM4-202ENST00000593564 DEGS2Q6QHC5 323 aa19.49■□□□□ 0.71
LSM4-202ENST00000593564 FAM185AQ8N0U4 392 aa19.49■□□□□ 0.71
LSM4-202ENST00000593564 OR51G2Q8NGK0 314 aa19.49■□□□□ 0.71
LSM4-202ENST00000593564 AQP3Q92482 292 aa19.49■□□□□ 0.71
LSM4-202ENST00000593564 CCDC124Q96CT7 223 aaKnown RBP19.49■□□□□ 0.71
LSM4-202ENST00000593564 SSX3Q99909 188 aa19.49■□□□□ 0.71
LSM4-202ENST00000593564 YIPF3Q9GZM5 350 aa19.49■□□□□ 0.71
LSM4-202ENST00000593564 RASL12Q9NYN1 266 aa19.49■□□□□ 0.71
LSM4-202ENST00000593564 TMEM269A0A1B0GVZ9 245 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 ANGPTL7O43827 346 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 MTRF1O75570 445 aaKnown RBP19.48■□□□□ 0.71
LSM4-202ENST00000593564 CALB2P22676 271 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 AANATQ16613 207 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 KCTD18Q6PI47 426 aaPredicted RBP19.48■□□□□ 0.71
LSM4-202ENST00000593564 C11orf88Q6PI97 169 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 HAGHLQ6PII5 290 aaPredicted RBP19.48■□□□□ 0.71
LSM4-202ENST00000593564 Q6ZTK2 550 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 PPP1R35Q8TAP8 253 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 MEGF9Q9H1U4 602 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 YY1AP1Q9H869 796 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 ZNF556Q9HAH1 456 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 C19orf12Q9NSK7 152 aa19.48■□□□□ 0.71
LSM4-202ENST00000593564 GNGT2O14610 69 aa19.47■□□□□ 0.71
LSM4-202ENST00000593564 IGLV3-1P01715 115 aa19.47■□□□□ 0.71
LSM4-202ENST00000593564 KIR2DS4P43632 304 aa19.47■□□□□ 0.71
LSM4-202ENST00000593564 EFNB2P52799 333 aa19.47■□□□□ 0.71
LSM4-202ENST00000593564 HCCSP53701 268 aa19.47■□□□□ 0.71
LSM4-202ENST00000593564 RIPPLY1Q0D2K3 151 aa19.47■□□□□ 0.71
LSM4-202ENST00000593564 LRRC75BQ2VPJ9 315 aa19.47■□□□□ 0.71
LSM4-202ENST00000593564 ZBTB37Q5TC79 503 aa19.47■□□□□ 0.71
LSM4-202ENST00000593564 THAP5Q7Z6K1 395 aa19.47■□□□□ 0.71
LSM4-202ENST00000593564 SIGLEC9Q9Y336 463 aa19.47■□□□□ 0.71
LSM4-202ENST00000593564 TET2Q6N021 2002 aaPredicted RBP19.47■□□□□ 0.71
LSM4-202ENST00000593564 CAPZA1P52907 286 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 APOFQ13790 326 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 LY6EQ16553 131 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 SMIM21Q3B7S5 101 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 CRIP3Q6Q6R5 217 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 ACP7Q6ZNF0 438 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 MOB3CQ70IA8 216 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 COMMD2Q86X83 199 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 HS3ST5Q8IZT8 346 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 POC1AQ8NBT0 407 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 OR4C13Q8NGP0 309 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 OR5K1Q8NHB7 308 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 OR51E1Q8TCB6 317 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 CANT1Q8WVQ1 401 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 RORBQ92753 470 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 TEX12Q9BXU0 123 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 MROQ9BYG7 248 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 PBOV1Q9GZY1 135 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 RANBP3Q9H6Z4 567 aaPredicted RBP19.46■□□□□ 0.71
LSM4-202ENST00000593564 SLC25A19Q9HC21 320 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 RAB18Q9NP72 206 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 GPR84Q9NQS5 396 aa19.46■□□□□ 0.71
LSM4-202ENST00000593564 RFPL4AA6NLU0 287 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 AQP12BA6NM10 295 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 RFPL4AL1F8VTS6 287 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 PSMD9O00233 223 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 GSC2O15499 205 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 ZNF254O75437 659 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 E2F6O75461 281 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 T-ENOLP0DO92 83 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 HOXB6P17509 224 aaKnown RBP19.45■□□□□ 0.7
LSM4-202ENST00000593564 ROM1Q03395 351 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 DMRTC1Q5HYR2 192 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 PLCXD3Q63HM9 321 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 AQP12AQ8IXF9 295 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 MKXQ8IYA7 352 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 CLPTM1LQ96KA5 538 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 TEAD3Q99594 435 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 HEXA-AS1Q9H8Q6 139 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 ENPP5Q9UJA9 477 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 PIGLQ9Y2B2 252 aa19.45■□□□□ 0.7
LSM4-202ENST00000593564 A0A1W2PPH5 198 aa19.44■□□□□ 0.7
LSM4-202ENST00000593564 ANXA8P13928 327 aa19.44■□□□□ 0.7
LSM4-202ENST00000593564 FAHP16930 419 aa19.44■□□□□ 0.7
LSM4-202ENST00000593564 RPL31P62899 125 aaKnown RBP19.44■□□□□ 0.7
LSM4-202ENST00000593564 ZNF679Q8IYX0 411 aa19.44■□□□□ 0.7
LSM4-202ENST00000593564 ZNF561Q8N587 486 aa19.44■□□□□ 0.7
LSM4-202ENST00000593564 CD177Q8N6Q3 437 aa19.44■□□□□ 0.7
LSM4-202ENST00000593564 CFHR4Q92496 578 aa19.44■□□□□ 0.7
LSM4-202ENST00000593564 OR8B4Q96RC9 309 aa19.44■□□□□ 0.7
LSM4-202ENST00000593564 NUFIP1Q9UHK0 495 aaKnown RBP19.44■□□□□ 0.7
LSM4-202ENST00000593564 PRR32B1ATL7 298 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 PRKACGP22612 351 aa19.43■□□□□ 0.7
LSM4-202ENST00000593564 ZNF829Q3KNS6 432 aaPredicted RBP19.43■□□□□ 0.7
LSM4-202ENST00000593564 ZNF684Q5T5D7 378 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms