RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ATP1B3P54709 279 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 MTCP1P56278 107 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 NKX6-1P78426 367 aaPredicted RBP11.52□□□□□ -0.57
VMP1-217ENST00000593168 PSG7Q13046 419 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 PRDX4Q13162 271 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 CEACAM21Q3KPI0 293 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 PLCXD3Q63HM9 321 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 AWAT2Q6E213 333 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 FAM131AQ6UXB0 335 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 WFDC8Q8IUA0 241 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 ZDHHC23Q8IYP9 409 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 CMTM4Q8IZR5 234 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 OR5A2Q8NGI9 324 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 NPRL2Q8WTW4 380 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 NRGNQ92686 78 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 SLC25A38Q96DW6 304 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 BORCS8Q96FH0 119 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 S100A16Q96FQ6 103 aaKnown RBP11.52□□□□□ -0.57
VMP1-217ENST00000593168 SPACA5Q96QH8 159 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 HIST1H2AAQ96QV6 131 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 PPP1R3EQ9H7J1 279 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 RHBDL2Q9NX52 303 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 NDRG3Q9UGV2 375 aa11.52□□□□□ -0.57
VMP1-217ENST00000593168 MRPS28Q9Y2Q9 187 aaKnown RBP11.52□□□□□ -0.57
VMP1-217ENST00000593168 TMEM272A0A1B0GTI8 110 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 FAM230AA0A1W2PPH8 454 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 DPRXA6NFQ7 191 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 TPPPO94811 219 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 RAB6AP20340 208 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 GCH1P30793 250 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 PTGFRP43088 359 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 NR4A2P43354 598 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 ZP1P60852 638 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 RPS23P62266 143 aaKnown RBP11.51□□□□□ -0.57
VMP1-217ENST00000593168 TFF3Q07654 80 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 SNTB2Q13425 540 aaKnown RBP11.51□□□□□ -0.57
VMP1-217ENST00000593168 ZNF79Q15937 498 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 DMRTC1Q5HYR2 192 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 RGS7BPQ6MZT1 257 aaPredicted RBP11.51□□□□□ -0.57
VMP1-217ENST00000593168 GLIPR1L1Q6UWM5 242 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 BAIAP2L2Q6UXY1 529 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 OR2W3Q7Z3T1 314 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 RNF144BQ7Z419 303 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 NUP37Q8NFH4 326 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 OR4M1Q8NGD0 313 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 SYNPRQ8TBG9 265 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 ZC3HAV1LQ96H79 300 aaKnown RBP11.51□□□□□ -0.57
VMP1-217ENST00000593168 C1orf147Q96MC9 270 aaPredicted RBP11.51□□□□□ -0.57
VMP1-217ENST00000593168 NKX3-1Q99801 234 aaPredicted RBP11.51□□□□□ -0.57
VMP1-217ENST00000593168 SRRQ9GZT4 340 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 CRIM1Q9NZV1 1036 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 GPR160Q9UJ42 338 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 PURGQ9UJV8 347 aaKnown RBP11.51□□□□□ -0.57
VMP1-217ENST00000593168 RAB22AQ9UL26 194 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 NOP16Q9Y3C1 178 aaKnown RBP11.51□□□□□ -0.57
VMP1-217ENST00000593168 SPG11Q96JI7 2443 aa11.51□□□□□ -0.57
VMP1-217ENST00000593168 MAP1AP78559 2803 aaPredicted RBP11.5□□□□□ -0.57
VMP1-217ENST00000593168 OR5B21A6NL26 309 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 TMEM14DPA8MWL7 114 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 LILRA1O75019 489 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 ZNF250P15622 560 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 MPV17P39210 176 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 OR3A4PP47883 348 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 FABP6P51161 128 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 QRFPP83859 136 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 FAM189A2Q15884 450 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 PYHIN1Q6K0P9 492 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 ASCL4Q6XD76 172 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 TMEM200AQ86VY9 491 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 GDPD1Q8N9F7 314 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 OR8G5Q8NG78 346 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 TNFAIP8L1Q8WVP5 186 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 HPSE2Q8WWQ2 592 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 OR5P3Q8WZ94 311 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 ITPKCQ96DU7 683 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 CCDC32Q9BV29 185 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 SLC22A4Q9H015 551 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 CADP27708 2225 aa11.5□□□□□ -0.57
VMP1-217ENST00000593168 ANKHD1Q8IWZ3 2542 aaKnown RBP11.49□□□□□ -0.57
VMP1-217ENST00000593168 IGKV1-27A0A075B6S5 117 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 PQLC2LA1A4F0 135 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 ATP6V1G2-DDX39BF2Z307 99 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 IGHV3-13P01766 116 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 VSIG8P0DPA2 414 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 MNDAP41218 407 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 PITPNBP48739 271 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 MMP15P51511 669 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 GNG3P63215 75 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 PITPNAQ00169 270 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 PLA2G7Q13093 441 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 IL18Q14116 193 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 ALKBH6Q3KRA9 238 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 C16orf87Q6PH81 154 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 DMRTC2Q8IXT2 367 aaPredicted RBP11.49□□□□□ -0.57
VMP1-217ENST00000593168 ZSCAN4Q8NAM6 433 aaPredicted RBP11.49□□□□□ -0.57
VMP1-217ENST00000593168 BHLHE23Q8NDY6 225 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 PXT1Q8NFP0 134 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 KCNG3Q8TAE7 436 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 TMEM171Q8WVE6 324 aa11.49□□□□□ -0.57
VMP1-217ENST00000593168 RFT1Q96AA3 541 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms