RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 CPT2P23786 658 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 C21orf33P30042 268 aaPredicted RBP12.77□□□□□ -0.37
TRIM47-206ENST00000592942 TGM4P49221 684 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 LCN2P80188 198 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 DOC2BQ14184 412 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 C6orf141Q5SZD1 244 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 PLCXD3Q63HM9 321 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 IL17RELQ6ZVW7 336 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 KCTD8Q6ZWB6 473 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 GLCCI1Q86VQ1 547 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 PRIMA1Q86XR5 153 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 FAM90A1Q86YD7 464 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 BPIFB6Q8NFQ5 453 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 AQP3Q92482 292 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 DACT3Q96B18 629 aaPredicted RBP12.77□□□□□ -0.37
TRIM47-206ENST00000592942 MYCBPQ99417 103 aaPredicted RBP12.77□□□□□ -0.37
TRIM47-206ENST00000592942 WDR13Q9H1Z4 485 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 CNOT2Q9NZN8 540 aaKnown RBP12.77□□□□□ -0.37
TRIM47-206ENST00000592942 ERVK-18Q9QC07 812 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 CTSZQ9UBR2 303 aa12.77□□□□□ -0.37
TRIM47-206ENST00000592942 DOCK11Q5JSL3 2073 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 IGHV3OR15-7A0A075B7D8 119 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 TRAV38-1A0A0B4J264 116 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 PPIAL4CA0A0B4J2A2 164 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 IGKV1-9A0A0C4DH69 117 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 IRGMA1A4Y4 181 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 ANKRD61A6NGH8 418 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 OGG1O15527 345 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 PHF1O43189 567 aaPredicted RBP12.76□□□□□ -0.37
TRIM47-206ENST00000592942 FOXH1O75593 365 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 GBX2P52951 348 aaPredicted RBP12.76□□□□□ -0.37
TRIM47-206ENST00000592942 MRPL28Q13084 256 aaKnown RBP12.76□□□□□ -0.37
TRIM47-206ENST00000592942 FGGYQ96C11 551 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 C10orf35Q96D05 121 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 NEIL1Q96FI4 390 aaPredicted RBP12.76□□□□□ -0.37
TRIM47-206ENST00000592942 PDCD1LG2Q9BQ51 273 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 TMPRSS13Q9BYE2 586 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 YTHDF1Q9BYJ9 559 aaKnown RBP12.76□□□□□ -0.37
TRIM47-206ENST00000592942 CHST5Q9GZS9 411 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 BABAM2Q9NXR7 383 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 CDC42EP3Q9UKI2 254 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 EXOSC1Q9Y3B2 195 aaKnown RBP12.76□□□□□ -0.37
TRIM47-206ENST00000592942 PCDHGB5Q9Y5G0 923 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 WNK2Q9Y3S1 2297 aa12.76□□□□□ -0.37
TRIM47-206ENST00000592942 IGKV1-27A0A075B6S5 117 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 EFCAB10A6NFE3 127 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 AKR7A2O43488 359 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 GYPAP02724 150 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 CCDC159P0C7I6 412 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 RPS2P15880 293 aaKnown RBP12.75□□□□□ -0.37
TRIM47-206ENST00000592942 MUC1P15941 1255 aaPredicted RBP12.75□□□□□ -0.37
TRIM47-206ENST00000592942 ZNF12P17014 697 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 CHRFAM7AQ494W8 412 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 HAGHLQ6PII5 290 aaPredicted RBP12.75□□□□□ -0.37
TRIM47-206ENST00000592942 CALHM1Q8IU99 346 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 GATAD2BQ8WXI9 593 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 RGP1Q92546 391 aaPredicted RBP12.75□□□□□ -0.37
TRIM47-206ENST00000592942 SGCDQ92629 289 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 SHARPINQ9H0F6 387 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 OPN4Q9UHM6 478 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 HHLA2Q9UM44 414 aa12.75□□□□□ -0.37
TRIM47-206ENST00000592942 TRBV2A0A0J9YWF9 115 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 A0A1B0GW55 424 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 NDUFA2O43678 99 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 SYNGR1O43759 233 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 DUX4L2P0CJ85 424 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 DUX4L3P0CJ86 424 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 DUX4L4P0CJ87 422 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 DUX4L5P0CJ88 424 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 DUX4L6P0CJ89 424 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 DUX4L7P0CJ90 424 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 MPZP25189 248 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 CDK5R1Q15078 307 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 CCDC58Q4VC31 144 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 RBM48Q5RL73 367 aaKnown RBP12.74□□□□□ -0.37
TRIM47-206ENST00000592942 ATPAF1Q5TC12 328 aaPredicted RBP12.74□□□□□ -0.37
TRIM47-206ENST00000592942 WDR25Q64LD2 544 aaPredicted RBP12.74□□□□□ -0.37
TRIM47-206ENST00000592942 FAHD2BQ6P2I3 314 aaPredicted RBP12.74□□□□□ -0.37
TRIM47-206ENST00000592942 RPL22L1Q6P5R6 122 aaKnown RBP12.74□□□□□ -0.37
TRIM47-206ENST00000592942 CRIP3Q6Q6R5 217 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 DUX4L9Q6RFH8 374 aaPredicted RBP12.74□□□□□ -0.37
TRIM47-206ENST00000592942 TMPRSS11AQ6ZMR5 421 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 AHSA2Q719I0 299 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 UTS2BQ765I0 119 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 RNF144BQ7Z419 303 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 ANGPTL5Q86XS5 388 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 ZNF676Q8N7Q3 588 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 OR5T2Q8NGG2 359 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 OR52N1Q8NH53 320 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 ZNF671Q8TAW3 534 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 FAHD2AQ96GK7 314 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 SSBP3Q9BWW4 388 aaPredicted RBP12.74□□□□□ -0.37
TRIM47-206ENST00000592942 BEX2Q9BXY8 128 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 SMURF1Q9HCE7 757 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 PAK1IP1Q9NWT1 392 aaPredicted RBP12.74□□□□□ -0.37
TRIM47-206ENST00000592942 KAAG1Q9UBP8 84 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 DUX4Q9UBX2 424 aa12.74□□□□□ -0.37
TRIM47-206ENST00000592942 TMEM212A6NML5 194 aa12.73□□□□□ -0.37
TRIM47-206ENST00000592942 SLC1A7O00341 560 aa12.73□□□□□ -0.37
TRIM47-206ENST00000592942 NOS1APO75052 506 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms