RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 YIPF7Q8N8F6 280 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 LY6G5BQ8NDX9 201 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 OR14K1Q8NGZ2 314 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 ANGPTL6Q8NI99 470 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 AQP3Q92482 292 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 TAF15Q92804 592 aaKnown RBP eCLIP11.45□□□□□ -0.58
APOC1-208ENST00000592535 LHX4Q969G2 390 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 ZDHHC16Q969W1 377 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 EME1Q96AY2 570 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 DNTTIP1Q9H147 329 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 PRDM13Q9H4Q3 707 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 CNTD2Q9H8S5 307 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 GPR173Q9NS66 373 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 NLKQ9UBE8 527 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 SNX5Q9Y5X3 404 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 V9GYS6 101 aa11.45□□□□□ -0.58
APOC1-208ENST00000592535 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 A0A1W2PQL4 384 aaPredicted RBP11.44□□□□□ -0.58
APOC1-208ENST00000592535 A6NIN4 97 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 OR2AT4A6NND4 320 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 EI24O14681 340 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 NRASP01111 189 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 IGHV1-69P01742 117 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 ALPLP05186 524 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 KRT8P05787 483 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 OR2T7P0C7T2 308 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 CDC42P60953 191 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 IL13RA1P78552 427 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 FOXL1Q12952 345 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 DGUOKQ16854 277 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 ODF4Q2M2E3 257 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 CDONQ4KMG0 1287 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 ZNF684Q5T5D7 378 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 TMEM42Q69YG0 159 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 OR10H4Q8NGA5 316 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 OR2T27Q8NH04 317 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 ZNF671Q8TAW3 534 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 GATAD2BQ8WXI9 593 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 H1FXQ92522 213 aaKnown RBP11.44□□□□□ -0.58
APOC1-208ENST00000592535 UBE2FQ969M7 185 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 SLC25A28Q96A46 364 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 TMIGD2Q96BF3 282 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 DCTN5Q9BTE1 182 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 ONECUT1Q9UBC0 465 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 KPTNQ9Y664 436 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 TENM1Q9UKZ4 2725 aa11.44□□□□□ -0.58
APOC1-208ENST00000592535 IGKV1D-17A0A075B6S4 117 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 METTL15A6NJ78 407 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 H3BSH0 61 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 GPR37O15354 613 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 SIGLEC5O15389 551 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 ACAA1P09110 424 aaPredicted RBP11.43□□□□□ -0.58
APOC1-208ENST00000592535 PSG2P11465 335 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 ATP6V1E1P36543 226 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 GABRA2P47869 451 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 TMED1Q13445 227 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 ZIK1Q3SY52 487 aaPredicted RBP11.43□□□□□ -0.58
APOC1-208ENST00000592535 CLVS2Q5SYC1 327 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 Q6ZSR3 168 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 VMO1Q7Z5L0 202 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 CATSPERDQ86XM0 798 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 PDZD9Q8IXQ8 264 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 C8orf46Q8TAG6 207 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 MED30Q96HR3 178 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 ZNF488Q96MN9 340 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 TNFRSF19Q9NS68 423 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 ACOXLQ9NUZ1 547 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 USE1Q9NZ43 259 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 SLC25A10Q9UBX3 287 aaPredicted RBP11.43□□□□□ -0.58
APOC1-208ENST00000592535 ZNF222Q9UK12 451 aa11.43□□□□□ -0.58
APOC1-208ENST00000592535 RRP15Q9Y3B9 282 aaKnown RBP11.43□□□□□ -0.58
APOC1-208ENST00000592535 A0A1B0GVI7 797 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 PQLC2LA1A4F0 135 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 DLGAP1O14490 977 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 SYNGR1O43759 233 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 SULT1C4O75897 302 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 MELTFP08582 738 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 NDUFB7P17568 137 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 CCL1P22362 96 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 HAAOP46952 286 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 ZNF85Q03923 595 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 PRB3Q04118 309 aaPredicted RBP11.42□□□□□ -0.58
APOC1-208ENST00000592535 ZFP1Q6P2D0 407 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 C16orf87Q6PH81 154 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 Q6YL49 198 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 POC1AQ8NBT0 407 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 RORBQ92753 470 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 RFKQ969G6 155 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 HRASLS5Q96KN8 279 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 ELL3Q9HB65 397 aaPredicted RBP11.42□□□□□ -0.58
APOC1-208ENST00000592535 NOX4Q9NPH5 578 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 SIRT7Q9NRC8 400 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 IMPAD1Q9NX62 359 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 MAB21L2Q9Y586 359 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 PCDHGB1Q9Y5G3 927 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 ORC6Q9Y5N6 252 aa11.42□□□□□ -0.58
APOC1-208ENST00000592535 A0A0U1RQK1 487 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 DHRS7CA6NNS2 312 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 E9PQ18 207 aa11.41□□□□□ -0.58
APOC1-208ENST00000592535 J3QT63 122 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms