RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	AMY2B	P19961	511 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	FPR2	P25090	351 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	ACTA2	P62736	377 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	ACTG2	P63267	376 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	RAB40B	Q12829	278 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	GALE	Q14376	348 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	C11orf91	Q3C1V1	193 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	FDX2	Q6P4F2	183 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	HAGHL	Q6PII5	290 aa	Predicted RBP	13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	USP43	Q70EL4	1123 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	SLC36A1	Q7Z2H8	476 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	ZNF573	Q86YE8	665 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	BPIFB2	Q8N4F0	458 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	OR2G2	Q8NGZ5	317 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	UPRT	Q96BW1	309 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	MRPL48	Q96GC5	212 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	MYCBP	Q99417	103 aa	Predicted RBP	13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	DNTTIP1	Q9H147	329 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	SNTG1	Q9NSN8	517 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	MRPS18A	Q9NVS2	196 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	FRRS1L	Q9P0K9	344 aa		13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622	RPL36	Q9Y3U8	105 aa	Known RBP	13.61	□□□□□ -0.23
CIRBP-233	ENST00000591622		A0A1B0GW55	424 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	LOC107986453	A0A1B0GWG9	222 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	PQLC2L	A1A4F0	135 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	ANKRD61	A6NGH8	418 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622		J3QLW9	94 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	WBP4	O75554	376 aa	Known RBP	13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	RGS9	O75916	674 aa	Predicted RBP	13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	VENTX	O95231	258 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	ECD	O95905	644 aa	Predicted RBP	13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	IGHA1	P01876	353 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	DUX4L2	P0CJ85	424 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	DUX4L3	P0CJ86	424 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	DUX4L4	P0CJ87	422 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	DUX4L5	P0CJ88	424 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	DUX4L6	P0CJ89	424 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	DUX4L7	P0CJ90	424 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	ZNF19	P17023	458 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	GLRA1	P23415	457 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	PEX2	P28328	305 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	TGM4	P49221	684 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	NANOS3	P60323	173 aa	Known RBP	13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	KLHL22	Q53GT1	634 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	TMEM244	Q5VVB8	128 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	BTN2A1	Q7KYR7	527 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	LHFPL3	Q86UP9	236 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	EGFL6	Q8IUX8	553 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	RDH10	Q8IZV5	341 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	FAM216B	Q8N7L0	139 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	ANGPTL6	Q8NI99	470 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	C22orf15	Q8WYQ4	148 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	ST8SIA4	Q92187	359 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	PELI1	Q96FA3	418 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	C4orf36	Q96KX1	117 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	SLC6A7	Q99884	636 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	SUCNR1	Q9BXA5	334 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	INPP5E	Q9NRR6	644 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	DUX4	Q9UBX2	424 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	DNHD1	Q96M86	4753 aa		13.6	□□□□□ -0.23
CIRBP-233	ENST00000591622	FBN3	Q75N90	2809 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	OR2AT4	A6NND4	320 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	NDUFB3	O43676	98 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	ISG15	P05161	165 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	HTR1A	P08908	422 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	HAAO	P46952	286 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	CCR9	P51686	369 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	HILS1	P60008	231 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	FGF12	P61328	243 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	ZNF691	Q5VV52	312 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	TTC23	Q5W5X9	447 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	ZNF788	Q6ZQV5	615 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	SYS1	Q8N2H4	156 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	PNLDC1	Q8NA58	520 aa	Known RBP	13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	OR52I1	Q8NGK6	324 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	CYGB	Q8WWM9	190 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	TMIGD2	Q96BF3	282 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	C10orf35	Q96D05	121 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	MED30	Q96HR3	178 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	ALG8	Q9BVK2	526 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	C19orf24	Q9BVV8	132 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	ERVK13-1	Q9NX77	482 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	RASL12	Q9NYN1	266 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	NLK	Q9UBE8	527 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	ZNF69	Q9UC07	566 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	SLC7A11	Q9UPY5	501 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	ARHGAP32	A7KAX9	2087 aa		13.59	□□□□□ -0.23
CIRBP-233	ENST00000591622	NKX6-3	A6NJ46	265 aa		13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622	ZNF879	B4DU55	563 aa		13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622		J3QT63	122 aa		13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622	GPR37	O15354	613 aa		13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622	SYNGR1	O43759	233 aa		13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622	NOS1AP	O75052	506 aa	Predicted RBP	13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622	CLIC3	O95833	236 aa		13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622	SERPINA3	P01011	423 aa		13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622	IGHV4-38-2	P0DP08	117 aa		13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622	IL13RA1	P78552	427 aa		13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622	ADARB1	P78563	741 aa	Known RBP	13.58	□□□□□ -0.24
CIRBP-233	ENST00000591622	IKZF1	Q13422	519 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms